Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02197 GCAAGCCGAGCCGATTCACAGGCCGAGGTTCGCGCTACCCGCAATCCAATAACAGCACGCGCGGTTGCACGTGCATACACACTCTTAACACGTAAGACTCTCACGGGACCAAACAAAAACAAATCACAGTTATTGAAACAAATAAATAAACACAGAAAAGTAGCGCACTGTAATAAAATAAGCGACAACGACAAAAGGGTCGTGTATATAACTACCCCCATTCCCAAACAGACCTTTCAGTCCTCTTGTTTTAACTCTCACCAACTCTACTCAGAGCAGAGAATCAAAGAGAGAGAGAGAGAGATACAGTACAGAACGCGCATCCTTCGCTTCGCTTCGCTTAAACCATTTATTCCTCTCAGCCACAAAGTCAAAACCCGCATTCTCAGCATTGACGGCGGAGGAATCACCGCCATTGTTGCCGGTGAAGCTCTCATTTACCTGGAGGATCAGATCCGTCTCCACACCTCCGATCCTCACGCTCAGATAGCTGATTTCTTCGACATCGTCGCCGGTACCGGCATTGGTGCCATCCTCGCTGCCATGATCACCGCCGGCGACGCCTTCGGCAGGCCGCTTTACACCGCCAGAGAAGCCATCCGTCTCGTCTCCGAGAGGAACTCCGAGCTCTACAAACTCAAATCCAGCGGCGTGTTCCGCCGGCGCCGGAGATTCTCGTCCAGGAGCATGGACAAAGTGCTGAAGCAAGTGTTCCAGAGAAAAGAGGACGGACGAATGTTGACCTTGAAGGACACGTGTAAACCACTCCTTATCCCTTGCTTCGACCTCAAGAGTTCTGCGCCGTTTGTTTTTTCACGTGCGGACGCCTCCCAGTCTCCGAGCTTCGACTTCGAACTCTGGAAGGTATGCCGTGCCACGTCAGCTACGCCGAGCCATTTCAAGCCGTTCGACTTCGCTTCCGTCGACGGAAAGACTTCGTGCTCCGCCGTGGACGGCGGCCTGGTGATGAACAACCCGACGGCGGCGGCCGTCACGCACGTTCTCCACAACAAGCGCGATTTCCCGTCGGTGAACGGCGTGGAGGATCTCCTTGTGCTCTCCTTGGGGAACGGATCGTGGAACGCAAAAGCGTGCGAGAATCGCACGTGCTCAACGCCGTCGGTGGTTGACATTGTGCTCGACGGTGTTTCCGAGACCATTGACCAGATGTTGGGGAACGCTTTCTGCTGGAACCGTACGGACTACGTCAGAATCCAGGCGTTCGGTTTGGGAAACGAAGCAATGAGGAAGGAGGAGGTGCTCAAAGAGAGGGGACTCGAGTCGTTACCGTTTGGCGGCAAGCGGTTACTTACGGAGACTAACGCAAACAGAATAGATAGCTTCGTGCAACGTCTTGTTGCCACCGGAAAACCAAGCCCACCGTCTAGTCCCTGCAAGGATTCCGCCGTTAACCCTCTGGCTAACGGCCGCTAGTTTTTGTTTTACTTCAATTTTTTAGCTTCCTTTTTTTGGATATTAATTAACTGTGTAAAGTGTAACTAGTGTTTTTACCTAGTTATGCCAGCTGTCGTAGTTAATAGCATTTAATAATTTACCACTTCTA 1564 0.5179 ASRADSQAEVRATRNPITARAVARAYTLLTRKTLTGPNKNKSQLLKQINKHRKVAHCNKISDNDKRVVYITTPIPKQTFQSSCFNSHQLYSEQRIKEREREIQYRTRILRFASLKPFIPLSHKVKTRILSIDGGGITAIVAGEALIYLEDQIRLHTSDPHAQIADFFDIVAGTGIGAILAAMITAGDAFGRPLYTAREAIRLVSERNSELYKLKSSGVFRRRRRFSSRSMDKVLKQVFQRKEDGRMLTLKDTCKPLLIPCFDLKSSAPFVFSRADASQSPSFDFELWKVCRATSATPSHFKPFDFASVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGSWNAKACENRTCSTPSVVDIVLDGVSETIDQMLGNAFCWNRTDYVRIQAFGLGNEAMRKEEVLKERGLESLPFGGKRLLTETNANRIDSFVQRLVATGKPSPPSSPCKDSAVNPLANGR 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02197 477 Pfam Patatin-like phospholipase 129 330 IPR002641 GO:0006629
Pste4g02197 477 Gene3D Cytosolic phospholipase A2 catalytic domain 120 458 - -
Pste4g02197 477 CDD Pat17_PNPLA8_PNPLA9_like 128 407 - -
Pste4g02197 477 PANTHER PATATIN-LIKE PROTEIN 6 101 467 - -
Pste4g02197 477 SUPERFAMILY FabD/lysophospholipase-like 125 412 IPR016035 -
Pste4g02197 477 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 129 331 IPR002641 GO:0006629
Pste4g02197 477 MobiDBLite consensus disorder prediction 455 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02197 Pste-Chr4 15954513 15956450 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02197 125 477 Acyl Lipid Metabolism Gene Families AT3G63200 71.309 0.0 530
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02197 4 15954513 15956450 Pste4g02197 4 15954513 15956450 ECH
Pste5g00878 5 5654131 5655602 Pste4g02197 4 15954513 15956450 PCT