Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02167 TATGAATATCAGCGCACAACATGTACCAACATCTAGCTAGAGTTTGAGAATTGTGATATTGTGTGAGTAGTAGTTGATAGAATAGAAGTAATGGGTGGTAAAGGGTTTGTGTTGTGTCTAGTTGCGGTCCTTGTGAGCACAATGTGGACTGAAAATGCAGCCCAATCAGGTTGCACCAGTACACTAACTAGCTTGAGCCCGTGTCTGAACTACATAATGGGAACTTTGTCAACTCCATCAACTTCATGTTGCTCCCAGCTCTCAAGCGTAGTCCAATCTTCTCCACAGTGCCTTTGCTCCGTCCTTAATGATGGGGGTTCCATTTTTGGAATCACTATAAATCAAACTCTTGCTCTATCTCTCCCTGGTGCTTGTAAAGTTCAAACTCCTCCTGTTAGCCAGTGCCAAGCTGGCAGTGGACCAACACCTCCTTCGATCGCTCCATCTGGTTCTCCTCCTGGTTCTTCAGCTGAATCACCTCAAGCCTCAATTTCACCTTCTGCTTTAGACTTTCCCTCGGGTGGATCTAAAACCGTGCCATCAACAGAGAGTGGTTCATCTGATGGAAGCGCTATTAAAGTCCCCTCCCACTTGGTGATCTATCTTATTGCCATTGTGTCTTGGGTCTCAACCTTCACCGCGTTCTAATTTTGAGTCAACAGAGATTTGGGTGCTGGTTTTTTTAATTGTC 691 0.4515 MGGKGFVLCLVAVLVSTMWTENAAQSGCTSTLTSLSPCLNYIMGTLSTPSTSCCSQLSSVVQSSPQCLCSVLNDGGSIFGITINQTLALSLPGACKVQTPPVSQCQAGSGPTPPSIAPSGSPPGSSAESPQASISPSALDFPSGGSKTVPSTESGSSDGSAIKVPSHLVIYLIAIVSWVSTFTAF 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02167 185 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 25 104 - -
Pste4g02167 185 Pfam Probable lipid transfer 11 105 IPR016140 -
Pste4g02167 185 MobiDBLite consensus disorder prediction 121 160 - -
Pste4g02167 185 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 9 160 IPR043325 -
Pste4g02167 185 SMART aai_6 28 105 IPR016140 -
Pste4g02167 185 Gene3D - 25 105 IPR036312 -
Pste4g02167 185 PRINTS Plant phospholipid transfer protein signature 82 99 IPR000528 GO:0006869|GO:0008289
Pste4g02167 185 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Pste4g02167 185 PRINTS Plant phospholipid transfer protein signature 48 62 IPR000528 GO:0006869|GO:0008289
Pste4g02167 185 MobiDBLite consensus disorder prediction 102 160 - -
Pste4g02167 185 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 27 106 IPR036312 -
Pste4g02167 185 CDD AAI_LTSS 35 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02167 Pste-Chr4 15767474 15768505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02167 4 176 Acyl Lipid Metabolism Gene Families AT2G48130 43.094 1.06e-41 137
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02167 4 15767474 15768505 Pste4g02167 4 15767474 15768505 ECH
Pste4g02167 4 15767474 15768505 Pste5g00959 5 6300699 6302219 PCT