Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02102 GGTCCTAAAAAGAGCTACGTCTATAGGAAGGCACTTTATCCATTTCTATCTAAATATCCTCTCCGCCATGGTGGCAACGAAACAGCGCTTGGATTTCCTCTGCGGAATGATCACGCTGCAACCTACTTCGACTTCACTACTCTAATGTACTATGCTCAGCTATGGAATTTGCAAGGACTATGTTTTATTCGTCTCCACCGTTTCCTCCCAGAACTCACCCTTGGAACACTCTCCCTTCGTCCTCTTCAACTTCCGACTTTCTACATAGTTGTGCTGCTGCTGGCAGCTGTTTTGATGCTTCGTGAACAAGCTTCCCCTACAGTTGCGTCTTGGTCTTCTAATTTTTCAGCACAGAATTTTCCTGCCTCAGTTCTTTTACAAGAGCAGCGAGATGAATGTAGGCCTCTTCTGCACATGTCTAAGGAAGACAAGGCATCACAGGCAATTTTAAATACAAGGCAGATGGATACAGCCACAGTTCTTGAAGAGAATAACACTGGAAATGCAGATCAGGTAGTGCTTAACTTTAGGAAGCACCTGCATCACTGGCCTCATTTACAGAACTTATTAGCTTCCTCACAAACAGGCGAAATTGCTGCTTCTTCAACTCTGCAGCATGTTTCTGCTGACTCAGAGAGGCGTACAAATGGTGTGCAATGTAATGGAGTTTCTCTTGCTAAGAAAGCTCTGTCTACCTCAAAACAAGCATCCTCAGTAGTTGAAAACTTGAAATCAGTTAAAGCTGATGATGATTCAATTCCTTTTGGTTTGTCTGATCCTTCAATTAGAAAGAATAAAACTGTGAGGTCAACACGGCTTCTAGAGAGACAATCAAAACAAAGAAAAGTACCCAAGTCAAAAGTTAAAGACGACGAAATGTACCTTGCAAGAAAGGATGACACACAAGAAAGGCTACATGTAGAAAGGAAGATAAATGAAGAATTTGATCAAAATGATCCCCTGCGCATGTTCTTGTGGCGTCCTGATTCAAAACAACTTTTGACACTTGAACAAGAATCTCAATTGATTTCTCAAATACAGGATTTATTGAGATTGGAAGAATTGAAGACCAGGCTTCAATCTCAATTTGGAAGGGAACCAACCGCTGCTGAATGGGCTGAGGGTGCTGGACTTAATTGTCGAATGCTGCATGCTCAGCTTCATTGTGGTAACAGAAGCAGAGAAAAGCTGATTCAAGCAAATTTACGCATGGTAGTCCATGTAGCCAAAAGTTATCAGGGGCGTGGTCTCAGCCTTCAGGACTTATTACAGGAGGGAAGTATGGGTCTCATGAAGAGTGTTGAAAAATTCAATCCCATAGCTGGTTGTCGATTTGGTAACTATGCATTTTGGTGGATAAGACAAGCAATAAGGAAGGCAGTATTTCGACATTCCAGGACAATCCGTCTGCCGGAGAAGGTATATAACTTATTGGGCAAGGTAATGGAGGCAAAAAAATTGTATATTCAGGAAGGAAATCTTCACCCAACTAAAGAAGAATTGGCAAGAAGGGTAGGAATCACAGTAGAAAAGCTTGACAAATTACTATTTTCTGCAAGAATTCCAATTTCTATGCAGCAGACTGTGTGGGCTGACCAAGATACAACTTTCCAGGAGATTACTGCAGACCCCACAGTTGAGGCCACAGATGTAACTGTTGAAAAACAGCTAATGAGGCGGCATGTGCTCAATGTCCTAAGCATCTTACGCCCCAAAGAAAGGAGAATAATTCGGTTAAGATATGGTTTTGAAGATGGTGAACAGAAATCTTTATCTGAAATTGGAGACATATTTGGTTTGTCTAAGGAAAGGGTTCGTCAATTGGAGATTCGAGCACTTTACAAGCTTAAGAAGTGTCTTGTCAAACAAGGACTTGATGCTTATGTAGACTTGCTTCTATAACTGAGTAGACAGCAAGGTTATGTAGTTCATTTCACATGGCTCTGAGACTACTTCTGGCTACGATCTGAATAGCGGTACCAGGATCGAACTTTTGAAGGCAAATTTAACTATAAATACTGTGATTAAGGACAAATTAGAGGACCCGATGGTTGCCAATTGGTAGAAGAAAATCGAAGTGTCTTAAAAGGTGAGGCTTATACAAATGTGAACACTTTTAGGTGAAAACATTGTTGAAATAATATTTATTCCAGAAAAGAAAGTTTTTTACGTAAAAATATCTTGTATATGTGTAACGTGGATTTGTATTCTAATATTCTTTTGATTGAATTTTCTGTTCCATCGTTACTCTTAGAATAAATGCATCTATCCTGGTACTTCTATGCAC 2287 0.4031 GPKKSYVYRKALYPFLSKYPLRHGGNETALGFPLRNDHAATYFDFTTLMYYAQLWNLQGLCFIRLHRFLPELTLGTLSLRPLQLPTFYIVVLLLAAVLMLREQASPTVASWSSNFSAQNFPASVLLQEQRDECRPLLHMSKEDKASQAILNTRQMDTATVLEENNTGNADQVVLNFRKHLHHWPHLQNLLASSQTGEIAASSTLQHVSADSERRTNGVQCNGVSLAKKALSTSKQASSVVENLKSVKADDDSIPFGLSDPSIRKNKTVRSTRLLERQSKQRKVPKSKVKDDEMYLARKDDTQERLHVERKINEEFDQNDPLRMFLWRPDSKQLLTLEQESQLISQIQDLLRLEELKTRLQSQFGREPTAAEWAEGAGLNCRMLHAQLHCGNRSREKLIQANLRMVVHVAKSYQGRGLSLQDLLQEGSMGLMKSVEKFNPIAGCRFGNYAFWWIRQAIRKAVFRHSRTIRLPEKVYNLLGKVMEAKKLYIQEGNLHPTKEELARRVGITVEKLDKLLFSARIPISMQQTVWADQDTTFQEITADPTVEATDVTVEKQLMRRHVLNVLSILRPKERRIIRLRYGFEDGEQKSLSEIGDIFGLSKERVRQLEIRALYKLKKCLVKQGLDAYVDLLL 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02102 633 PRINTS Major sigma-70 factor signature 590 605 IPR000943 GO:0003700|GO:0006352|GO:0006355
Pste4g02102 633 PRINTS Major sigma-70 factor signature 421 434 IPR000943 GO:0003700|GO:0006352|GO:0006355
Pste4g02102 633 PRINTS Major sigma-70 factor signature 445 453 IPR000943 GO:0003700|GO:0006352|GO:0006355
Pste4g02102 633 PRINTS Major sigma-70 factor signature 569 581 IPR000943 GO:0003700|GO:0006352|GO:0006355
Pste4g02102 633 PRINTS Major sigma-70 factor signature 605 616 IPR000943 GO:0003700|GO:0006352|GO:0006355
Pste4g02102 633 Pfam Sigma-70, region 4 566 618 IPR007630 GO:0003700|GO:0006352|GO:0006355
Pste4g02102 633 Gene3D - 549 621 IPR036388 -
Pste4g02102 633 Gene3D - 314 466 - -
Pste4g02102 633 Pfam Sigma-70 region 3 477 546 IPR007624 GO:0003700|GO:0006352|GO:0006355
Pste4g02102 633 ProSitePatterns Sigma-70 factors family signature 2. 590 616 IPR000943 GO:0003700|GO:0006352|GO:0006355
Pste4g02102 633 NCBIfam sigma-70 family RNA polymerase sigma factor 393 620 IPR014284 GO:0003700|GO:0006352|GO:0006355
Pste4g02102 633 Pfam Sigma-70 region 2 397 466 IPR007627 GO:0003700|GO:0006352|GO:0006355
Pste4g02102 633 CDD Sigma70_r4 559 617 - -
Pste4g02102 633 ProSitePatterns Sigma-70 factors family signature 1. 421 434 IPR000943 GO:0003700|GO:0006352|GO:0006355
Pste4g02102 633 SUPERFAMILY Sigma2 domain of RNA polymerase sigma factors 317 467 IPR013325 GO:0003700|GO:0006352|GO:0006355
Pste4g02102 633 Gene3D - 470 547 IPR036388 -
Pste4g02102 633 PANTHER RNA POLYMERASE SIGMA FACTOR RPO 219 629 - -
Pste4g02102 633 SUPERFAMILY Sigma3 and sigma4 domains of RNA polymerase sigma factors 530 629 IPR013324 -
Pste4g02102 633 SUPERFAMILY Sigma3 and sigma4 domains of RNA polymerase sigma factors 470 543 IPR013324 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02102 Pste-Chr4 15370770 15376111 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02102 4 15370770 15376111 Pste4g02102 4 15370770 15376111 ECH
Pste5g01954 5 12394060 12398642 Pste4g02102 4 15370770 15376111 PCT