Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01222 GGTGGACTCAACAGAGAAAACGATATATGCGTTTCCGAGTCCCCAAGTCCGTTGTTTTTCACTGCTGAGCGAGACTTGGTTTTGTTAACAAACATAATTATAAATACGCAACCCAAACTCTGTTTTCTTCTTTAACAACAACAAAAAAATCCCACTTTCTTTTTATTTCCCTTACCTGTAAGAAACTGAGAGAAAGTAAAGGTTCATTTTTTAACCCTCTTTCTTCACAGAAGCGATCTCTGAAGCCGACCCATTTTGGAATTCGGAAACCCCAGTGCTGATCGCTCTCTGGGTGTTCCCAAAATGAAGCTTCGGAGATCTTCGCTTTGTGCCTTTCTAGGGTTTCTTCTGCTGTCCCTTTCGCCGCCGTCAGTGGCGAAATTCGTTGTGGAGAAGAACAGCTTGACGGTGACGTCGCCGGACAACATCAAGGGCACGCACGACAGCGCGATTGGCAACTTCGGGATACCGCAATACGGTGGCAGCATGGCTGGTAACGTCGTGTACCCTAAGGACAACAAAAAGGGTTGCAAGGAGTTCGATGAGTATGGGATTTCCTTCAAATCCAAGCCCGGTGCTCTTCCCACTATCGTTTTGCTCGATCGAGGAAATTGCTTCTTTGCTTTAAAGGTCTGGAATGCACAAAAGGCTGGAGCTTCTGCTGTTCTTGTTGCAGATGATATCGAGGAGAAGTTGATAACCATGGATACTCCTGAAGAGGATGGGTCGTCTGCAAAATACATAGAGAACATAACAATACCATCTGCTCTCATTGAAAAAAGTTTTGGTGAAAAATTAAAGGATGCCATAAGTAATGGGGATATGGTCAATGTAAATCTTGATTGGAGAGAGGCTGTCCCCCACCCGGACGACCGTGTGGAGTATGAATTGTGGACCAACAGCAACGATGAGTGTGGAGTTAAATGTGATATGTTGATGGAATTTGTGAAAGATTTTAAGGGTGCTGCACAGATATTGGAGAAGGGTGGTTATACCCAATTTACACCCCATTATATAACTTGGTACTGTCCTCAGGCATTCACATTAAGCAAACAGTGCAAGTCCCAGTGCATAAATCATGGGAGATATTGTGCTCCAGATCCTGAGCAGGATTTCAGCACTGGTTATGATGGGAAAGATGTGGTTATTGAAAATTTGAGGCAGCTATGCGTTTTCAAGGTGGCAAATGAAACCAAAAAGCCTTGGGTCTGGTGGGATTATGTTACTGATTTTCAAATTAGGTGCCCAATGAAGGAGAAAAAGTATAACAAGAAATGCCTTGATATTAAAAAAATTGAAAGGTGCATGGGAGATCCTAATGCAGATTCTGAAAATCCTGTTTTGAAGGAAGAGCAAGATGCCCAAATTGGGAAGGGATCACGAGGTGATGTTACCATATTGCCTACTCTAGTTGTCAATAATAGACAGTACCGAGGAAAATTGGAGAAAGGTGCTGTTATGAAAGCTATTTGTGCTGGTTTTGAAGAAACTACTGAACCAGCTGTTTGTTTGAGCAGTGATGTGGAGACAAATGAGTGTTTGGATAACAATGGTGGTTGCTGGCAGGATAAATCAGCTAACATCACTGCATGCAAGGATACATTCCGTGGGAGAGTATGCGAATGCCCCTTGGTGGATGGTGTGCAGTTCAAAGGAGATGGTTATACAACCTGTGCAGCTAGTGGACCTGGGCGGTGCAAGATAAACAATGGAGGTTGTTGGCATGAAGCTCGGAATGGACATGCATATTCTGCTTGTTCGGATGATGGTGGGGTTAAATGCCAGTGTCCTGCAGGCTTTAAAGGTGATGGTGTCAAAAATTGTGAAGACATCGATGAATGCAGAGAGAAGAAAGCTTGTCAGTGCCCTGAATGTAGCTGCAAGAATACCTGGGGCAGCTATGACTGCACTTGTAGTGGGGATCTTTTGTATATAAGGGACCACGATACTTGCATAAGTAAAACTGCCAGGCAGGAGGGAAAATCAGTTTGGGCTGCTTTTTGGGTTATTTTAGTTGGTTTGATCGTGGCTGCTGCTGGGGCATACCTTGTGTACAAATATAGAATAAGGTCATATATGGATTCTGAAATCAGAGCCATCATGGCACAGTATATGCCGTTGGACAGCCAAGGAGAGGTTGTAAATCATGTGAATGAAGAAAGAGCGTGAAAGGTTAGCCTCTTTGGATGATTATGTGTGAAGCCTGGGTTTAGCTTACCCTGCCTACCTTTTGGAGCATTTGAATTTGATAGACTGTATCATATGGACAATAAAAGTTTCAGAATTAGATAGTTGTCCTACGTTTTTATTGGGATTATGTAGCAACTTGTATACTTAATTTAGGGCAGACTTTTTAAGTTATTTTCATTTCACTAGATTCTAGGATTTTCGATTATGTGACTTGTTACACACTTGTGCTTGTAACCTATCGTTTTTGTTTTTTTTTAAAAAAATTATAGGCTTAAGTAAACATTGTTCTTTCATCGATTGGAGGGTGGGTATTATCTTTCACTCTTACATTTCGGTAGGAAAATTGGGAAGAGGGAGGAGAAATGAGCGAGATGAAAAAGGAGCTTGTTTGGTTGTGTAAAAAT 2594 0.4217 MKLRRSSLCAFLGFLLLSLSPPSVAKFVVEKNSLTVTSPDNIKGTHDSAIGNFGIPQYGGSMAGNVVYPKDNKKGCKEFDEYGISFKSKPGALPTIVLLDRGNCFFALKVWNAQKAGASAVLVADDIEEKLITMDTPEEDGSSAKYIENITIPSALIEKSFGEKLKDAISNGDMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMEFVKDFKGAAQILEKGGYTQFTPHYITWYCPQAFTLSKQCKSQCINHGRYCAPDPEQDFSTGYDGKDVVIENLRQLCVFKVANETKKPWVWWDYVTDFQIRCPMKEKKYNKKCLDIKKIERCMGDPNADSENPVLKEEQDAQIGKGSRGDVTILPTLVVNNRQYRGKLEKGAVMKAICAGFEETTEPAVCLSSDVETNECLDNNGGCWQDKSANITACKDTFRGRVCECPLVDGVQFKGDGYTTCAASGPGRCKINNGGCWHEARNGHAYSACSDDGGVKCQCPAGFKGDGVKNCEDIDECREKKACQCPECSCKNTWGSYDCTCSGDLLYIRDHDTCISKTARQEGKSVWAAFWVILVGLIVAAAGAYLVYKYRIRSYMDSEIRAIMAQYMPLDSQGEVVNHVNEERA 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01222 621 Gene3D Laminin 402 457 - -
Pste4g01222 621 ProSitePatterns Calcium-binding EGF-like domain signature. 509 535 IPR018097 GO:0005509
Pste4g01222 621 Pfam PA domain 63 165 IPR003137 -
Pste4g01222 621 Gene3D - 24 188 - -
Pste4g01222 621 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 2 611 - -
Pste4g01222 621 CDD EGF_CA 509 537 - -
Pste4g01222 621 FunFam vacuolar-sorting receptor 1 402 458 - -
Pste4g01222 621 SMART egfca_6 509 551 IPR001881 GO:0005509
Pste4g01222 621 Coils Coil 613 621 - -
Pste4g01222 621 ProSitePatterns EGF-like domain signature 2. 493 507 IPR000742 -
Pste4g01222 621 CDD PA_VSR 52 179 - -
Pste4g01222 621 Gene3D Laminin 463 543 - -
Pste4g01222 621 FunFam Vacuolar-sorting receptor 1 24 188 - -
Pste4g01222 621 SUPERFAMILY PA domain 32 169 IPR046450 -
Pste4g01222 621 Pfam Complement Clr-like EGF-like 492 512 IPR026823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01222 Pste-Chr4 8967182 8972723 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01222 25 621 Miscellaneous Gene Families AT2G14740 83.003 0.0 1074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01222 4 8967182 8972723 Pste4g01222 4 8967182 8972723 ECH
Pste1g00688 1 2162936 2167981 Pste4g01222 4 8967182 8972723 PCT