Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00688 TGAAACGAGGAGAGAGAGAGAGGGAGAGTTGATTATCGGTTGAGAGAGCCTTGAAATGAAGAGTGGAATTTGTCTCTTAGGGGTGAGCATTGAGAGAGATGTTTGTATTATGTAGTGTGGAGAAGAGAAGAAGAGAGTGGTTTTTGTGTAAGAAAAATAAGTGATACCCAACACAACAATAGAGGTGATAGAGATGATGATTTTGTTTTTGTAAAAGAAGAAGAAGTTGCAACATTGAGTAGAAAGAAAGAGAGAGAGAATAATTGGGTGTTGATAAAAGAAAGAAAAATGAAGACTTGGAGATGTTTGTTGAGTTTGTTATTAGTGTTGTTGCCTGTGTCAACAATGGGTCGATTCGTGGTGGAGAAGAACAGCCTCAGAGTGACATCGCCGGAGAAAATAAGAGGCACACAAGACAGTGCCATTGGGAACTTTGGCATACCTCAGTACGGTGGTAGCATGGCCGGAAACGTGGTTTACCCAAAGGATAACAAGAAGGGTTGTAAAGAGTTTGATGAGTCTGGAATTTCCTTCAAATCAACCCCCGGTGCTCTTCCCACCATTGTTTTGCTGGATCGTGGAAGTTGCTTCTTTGCTTTGAAGGTGTGGAATGCCCAGAAGGCTGGAGCTTCTGCAGTTCTTGTTGCAGATGACGTTGAGGAGCCTTTAATAACTATGGACACGCCAGAAGAGGATGGGTCGTCTGCCAAATATGTGGAGAACATAACTATACCGTCTGCTCTAGTTGGAAAGAGTTTTGGTGAAAAATTAAAGGATGCCATTAGTGGTGGAGACATGGTAAACGTAAACCTTGATTGGAGAGAGGCTGTTCCTCACCCGGATGATCGCGTGGAGTACGAGTTGTGGAGCAACAGCAATGATGAGTGTGGAGTTAAGTGTGATATGTTGATGGATTTTTTGAAGGATTTCAAGGGTGCTGCCCAGATACTTGAGAAAGGTGGTTACACTCAGTTCACTCCCCATTATATAACGTGGTACTGTCCTCATGCTTTCACTTTGAGCAAGCAATGCAAGTCTCAATGCATTAATCATGGAAGATATTGCGCTCCTGATCCAGAGCAGGACTTCACCACAGGTTATGATGGCAAAGATGTCGTTATTGAAAATCTAAGGCAGCTCTGTGTTTTCAAGGTGGCTAACGAAACTCTGAAGCCTTGGGTTTGGTGGGACTATGTCACTGATTTTCAAATTAGATGCCCAATGAAGGACAAAAAGTACAATAAGGAATGTGCAGATGCTGTAATTAGATCACTGGGTCTTAATATTGAAAAGATTGAAAAATGCATGGGAGATCCAGATGCTGATACTGATAATCCCGTTTTGAAAGAAGAGCAAGATGCCCAAATTGGAAAGGGATCACGAGGTGATGTTACCATATTGCCGACTCTTGTGGTCAATAATCGACAATATCGAGGAAAATTGGAGAAAGGAGCTGTTCTAAAGGCTATTTGTTCTGGGTTTGAGGAAACTACTGAACCAGCTGTTTGCTTGAGCGGTGCTAGTGGACTTGGGCGTTGCAAGATAAACAATGGAGGCTGTTGGCATGAGGCCCGGAATAGACATGCATTTTCTGCTTGTTTGGATAATGGAGGGGTTAAATGCCAGTGTCCCACTGGGTTTAAAGGTGATGGTGTCAGAAACTGTGAAGATATTGACGAATGCAAAGAGAAGAAAGCTTGTCAGTGCTCTGAATGTAGCTGCAAGAATACCTGGGGAAGCTATGACTGCAGTTGTAATGGAGATCTTCTGTATATGAGGGACCATGATACCTGCATAAGTAAAACTGGTAGTCAGGGAAGATCTACTTGGGCTGCTTTTTGGGTGATTTTACTTGGCGTATTTATGATTGCTGGTGGGGCATTCCTGGTGTACAAGTACAGAATAAGGCAATACATGGATTCCGAAATCAGAGCAATCATGGCACAATATATGCCCTTGGACAGCCAAGCAGAAGTTCCAAATCACATCAATGATCAAAGAGCATGAAAGGAAAAATAGATCAGTCTCTTGGGATTTCACGGCAGGCAGCATGGGTGTGGCTTTTACTGTGCCATCTTTGGGCCCTTTTGAACTACATGACCAGTGAATTTAGTAGACTTTATCATGTGAACAGTATAAGATCGACTTTTAGAATGTTGTCCTGCATGTTTTTATTTGGGTTAGAATTGTAGCATTTTGTATACTTGTAAGGGCAGACTGTGGTACTGTTTCTCCAAATTCTAGGATATCTGCTTCCACCCACAAGATCGTAACTTATCGTGCTGTAATACATGCAAGTTAACGTCCTAATTTTGTTTCCTTGCTCTGTATGACGATCGTCCATTTCATTGACCAGATGAAATCCTGTTCCTCTCCCTAAATGTCCTTAGCTGTTACCGATTGAGTTACTAAGAATGTCCACTTTTTACCATTTTATTGGTAGTGGCTGCGTGAAAATTGGTTTCAAGATGTGAATTGGCATGCATTT 2488 0.4216 MKTWRCLLSLLLVLLPVSTMGRFVVEKNSLRVTSPEKIRGTQDSAIGNFGIPQYGGSMAGNVVYPKDNKKGCKEFDESGISFKSTPGALPTIVLLDRGSCFFALKVWNAQKAGASAVLVADDVEEPLITMDTPEEDGSSAKYVENITIPSALVGKSFGEKLKDAISGGDMVNVNLDWREAVPHPDDRVEYELWSNSNDECGVKCDMLMDFLKDFKGAAQILEKGGYTQFTPHYITWYCPHAFTLSKQCKSQCINHGRYCAPDPEQDFTTGYDGKDVVIENLRQLCVFKVANETLKPWVWWDYVTDFQIRCPMKDKKYNKECADAVIRSLGLNIEKIEKCMGDPDADTDNPVLKEEQDAQIGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTEPAVCLSGASGLGRCKINNGGCWHEARNRHAFSACLDNGGVKCQCPTGFKGDGVRNCEDIDECKEKKACQCSECSCKNTWGSYDCSCNGDLLYMRDHDTCISKTGSQGRSTWAAFWVILLGVFMIAGGAFLVYKYRIRQYMDSEIRAIMAQYMPLDSQAEVPNHINDQRA 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00688 572 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 5 561 - -
Pste1g00688 572 SUPERFAMILY PA domain 91 167 IPR046450 -
Pste1g00688 572 SMART egfca_6 461 503 IPR001881 GO:0005509
Pste1g00688 572 CDD EGF_CA 461 489 - -
Pste1g00688 572 Pfam PA domain 59 161 IPR003137 -
Pste1g00688 572 CDD PA_VSR 48 175 - -
Pste1g00688 572 FunFam Vacuolar-sorting receptor 1 20 184 - -
Pste1g00688 572 SUPERFAMILY Growth factor receptor domain 415 504 IPR009030 -
Pste1g00688 572 ProSitePatterns Calcium-binding EGF-like domain signature. 461 487 IPR018097 GO:0005509
Pste1g00688 572 Pfam Complement Clr-like EGF-like 444 464 IPR026823 -
Pste1g00688 572 ProSitePatterns EGF-like domain signature 2. 445 459 IPR000742 -
Pste1g00688 572 Gene3D Laminin 414 465 - -
Pste1g00688 572 Gene3D Laminin 466 503 - -
Pste1g00688 572 Gene3D - 20 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00688 Pste-Chr1 2162936 2167981 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00688 21 572 Miscellaneous Gene Families AT2G14740 75.702 0.0 961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00688 1 2162936 2167981 Pste1g00688 1 2162936 2167981 ECH
Pste1g00688 1 2162936 2167981 Pste4g01222 4 8967182 8972723 PCT