Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03696 AACAAGTCCAAATCCCTCACGCAATGCACAAAATACAGAGAAAACAAACGAGCCCTTTTCAAGTTTGATGTTACACCAGGTAGCATAGAACTACAAACTACGAAGCTACAGTGGCGTGTGGGAGTAGTGGAAATGAAAAAGCAGTGTTGTGAGGAATCAAAGACAAATATTGGATCCTCAGAATGCTGGTTCGACGATTCATCCATTGTGGATGTGGATTACTTTGTGAAGACCCTTTCAAGCATTAAACAGAAAGGTGTTCGTGAAGATTTGATTGGTTCCATCATCACTCACTATGCCTCCATATGGCTCCCTGACCTCTCTGCCTCTGCTGAAAATGGTGCCAGTGTCACCACTCAGTTCCAATCCCCCGGAAGTGTCACAACTTCATGGATGAAGAAGAGGTTCTTTGTGGAGACCTTGGTGAGTGTTCTGCCTCCTGAGAAGGATTCTGTCCCATGCAACTTCCTCCTTCGTCTTCTCAGAACAGCCAACATGGTTCGGGTTGATGCCACTTATGGAGCTGAGCTTGAGAACCGCATTTCGTGGCAGCTAGACCAAGCTTCTCTCAAAGAGCTCTTGATACCCTCCTTCAGCCACACGTGTGGGACACTCTTAGATGTTGAGCTTGTCCTCAGGTTGGTTAAGAGGTTTATGAGTTTGGACCGTGATGGTGCTGCTTTGGTTAAGGTGGCCAAGTTGGTAGATTGCTACCTCGCTGAGGCTGCTGTTGACGCCAATTTGACATTGTCCGAGTTCCTTGCACTTGCTGGAACTCTTCCAAGCCATGCAAGAGCCACGGATGATGGCCTGCACATCCAGGTGTGTCAAAGCAAGAAAGGAAGGAGGTTGCTTGATAGCAGGAAACTGACAGCAGAGGCATCAGTTCATGCAGTTCAAAATGAACGGTTGCCCGTGAGAGCAGTGATTCAGGTGGTGTTGTCTGAACAAAGCAAAGTGAAGCAGCAAGAATGGAGTTGGAGTGGGTTGAGGAGCCCGAGTGGACGTTGCCTTTCAATTTCAAAGCGTGAAATGAATGCTCAACAAATGGAGATAAGGAAGCTGAAGGAAGATGTTTACAGGCTGCAAAGCCAGTTCAGTGCTATGCAAGTGCAGATGGAGAGGCTGTTAGCCAGGAGGAAGGGACTGTTCAAATGGAAAAGGTTTGAAATGCCTATTTTTAGCACAAATGTGGGAGAAGAGGAAGAGGCTCAGGCCCAGAAGGACATCAAAACCAGTTTGGTCAAAACTAGGACTCCCCACAAGTGGACCAAATCTATGTCCTCACTCCTCAAATACACCCTCTGA 1308 0.4725 NKSKSLTQCTKYRENKRALFKFDVTPGSIELQTTKLQWRVGVVEMKKQCCEESKTNIGSSECWFDDSSIVDVDYFVKTLSSIKQKGVREDLIGSIITHYASIWLPDLSASAENGASVTTQFQSPGSVTTSWMKKRFFVETLVSVLPPEKDSVPCNFLLRLLRTANMVRVDATYGAELENRISWQLDQASLKELLIPSFSHTCGTLLDVELVLRLVKRFMSLDRDGAALVKVAKLVDCYLAEAAVDANLTLSEFLALAGTLPSHARATDDGLHIQVCQSKKGRRLLDSRKLTAEASVHAVQNERLPVRAVIQVVLSEQSKVKQQEWSWSGLRSPSGRCLSISKREMNAQQMEIRKLKEDVYRLQSQFSAMQVQMERLLARRKGLFKWKRFEMPIFSTNVGEEEEAQAQKDIKTSLVKTRTPHKWTKSMSSLLKYTL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03696 435 PANTHER OS12G0117600 PROTEIN 45 401 IPR043454 -
Pste3g03696 435 Pfam NPH3 family 62 271 IPR027356 -
Pste3g03696 435 ProSiteProfiles NPH3 domain profile. 61 319 IPR027356 -
Pste3g03696 435 Coils Coil 338 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03696 Pste-Chr3 29202626 29204887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03696 59 321 EF-hand Containing Proteins AT3G44820 32.026 1.12e-33 131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03696 3 29202626 29204887 Pste3g03696 3 29202626 29204887 ECH
Pste3g03696 3 29202626 29204887 Pste6g00575 6 2167832 2169822 PCT