Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03555 ATGGGATTGGTGGGAGGCGAGGTCCGCGTCAGCCCAAGCAGTTCAGTCTTCTTCACCTCAGCCTTTAAAAGCAGCACTACTGAAAATTCTTCAAATTTGCTCCAAGGAAGGGAACCAAAGCTCTCTGCAGCATTTTACTTTTCAACTATGTGCAATGTGTTACCCTTTCTGCTTTGTTTTCTCATTGCTTCTGCTACGGCCTCAGTGTCCTATGACTCAAAGGCTATCACCATTAATGGCCAGAGAAGGATCCTCATTTCTGGATCCATTCATTACCCCAGGAGCACCCCTGAGATGTGGCCAGATCTTATCAAGAAGGCCAAGGACGGCGGTTTGGATGTGATTCAGACTTATGTTTTCTGGAATGGACACGAACCTTCACCTGGCAAGTATTATTTTGAGGGCAACTATGATCTGGTGAAGTTCCTAAAGCTCGTCCAGCAAGCAGGCCTTTATGTTCATCTCAGGATTGGTCCTTATGTCTGTGCTGAGTGGAACTTTGGCGGTTTCCCTGTTTGGCTAAAGTACATTCCAGGAATCAGCTTCAGAACAGACAATGAGCCATTTAAGTACCAAATGCTCAAATTTACCACCAAGATTATTGATTTGATGAAAGCCGAGAGGTTATATGAGACTCAGGGAGGTCCAATAATTATGTCCCAGATTGAAAATGAATATGGACCTATAGAGTATGAGATTGGTGCTGCTGGTAAAGCTTACTCCAAGTGGGCAGCAGATATGGCTATTGGACTTGGTACTGGGGTTCCATGGGTCATGTGCAAGCAAGATGATACTCCTGATCCTCTTATTAACACTTGCAATGGCTTCTACTGTGATTATTTTTCTCCAAATAAGGCTTACAAACCCAAGATGTGGACAGAAGCATGGACTGGCTGGTTTACTGAGTTTGGAGGTCCTGTTCCTCATCGACCTGCTGAAGACTTGGCATTTTCAGTAGCAAGGTTTATACAGAAGGGGGGATCATTTGTAAATTATTACATGTATCATGGAGGAACAAATTTTGGTCGAACTGCTGGTGGCCCCTTTATTGCTACAAGCTATGATTATGACGCACCACTTGATGAATATGGATTGCTCAGGCAACCAAAATGGGGCCATCTGAAGGATTTGCACAGAGCAATAAAACTCTGTGAACCAGCTTTAGTATCTGGAGATCCTACTGTAACAAAGATTGGAAACTATCAAGAGGCTCATGTCTTTAACTCAAAGTCGGGAGCTTGTGCTGCATTCCTTGCAAACTATAACCCCAAATCTTATGCAACAGTGGCGTTTGGAAATATGCATTACAACTTGCCTCCTTGGTCTATAAGCATTCTTCCTGACTGCAAGAACACTGTTTATAACACTGCAAGGGTTGGTTCTCAGAGTGCCCAGATGAAGATGACTCGGATCCCTATTCATGGCGGACTCTCTTGGCAATCGTTCAATGAAGAGACTACCACTATTGATGATAGTTCCTTCACAATGACTGGCCTGTTGGAGCAGTTAAATACAACAAGAGATTTATCTGACTACTTGTGGTACTCCACAGATGTTGTGGTGGATCCCAGTGAAGGATTTCTGAGAAATGGAAAGGATCCTGTTCTTACTGTATTTTCTGCTGGGCATGCTCTGCATGTTTTTATAAATGGAACTGTATATGGAAGCTTAGAATTCCCTAAACTAACATTTAGCGAGGGAGTGAAGCTCAGAGCTGGTGTCAACAAGATCTCTCTTCTAAGTGTTGCAGTTGGACTCCCGAATGTTGGTCCTCATTTTGAAACATGGAATGCTGGTGTTCTTGGTCCAATTTCATTAAGTGGTCTTAACGAAGGTAGAAGGGACTTGTCTTGGCAGAAATGGTCTTACAAGGTCGGTCTTAGAGGTGAAATCTTGAGTCTTCATTCTCTCAGTGGAAGTTCTTCGGTGGAGTGGATTCAGGGATCTTTAGTTTCTCAAAGGCAGCCATTAACTTGGTACAAAACAACATTTGATGCCCCAGTTGGGACTGCACCATTGGCTTTAGACATGAACAGCATGGGCAAAGGTCAAGTGTGGTTAAATGGACAGAATCTTGGCCGCTACTGGCCTGCTTATAAAGCATCCGGTACCTGTGATTACTGTGACTATGCTGGAACTTATAACGAGAATAAATGCAGAAGTAACTGTGGCGAGGCTTCTCAAAGATGGTACCATGTTCCTCATTCATGGTTAAAGCCAACCGGAAATTTATTGGTTGTGTTTGAAGAGCTAGGTGGAGACCCCAATGGAATCTTTTTGGTCAGAAGGGACATAGATAGTGTATGTGCTGATATTTATGAGTGGCAGCCAAATCTTATAAGCTATCAGATGCAAACTTCTGGTAAAGGACCTGTGAGACCAAAAGTTCACTTGTCATGTAGTCCTGGACAGAAAATCTCATCAATCAAGTTTGCTAGCTTTGGTACTCCAGTGGGTTCTTGTGGAAACTTCCATGAAGGAAGCTGTCATGCTCACAAGTCTTATGATTCTTTTGAAAGGAATTGTGTTGGACAGAACTGGTGCACAGTAACAGTTTCTCCTGAAAATTTTGGAGGAGATCCATGTCCAAATGTCTTGAAGAAACTCTCAGTGGAAGCTATTTGTTCCTGATCATTTTAAATATATGGATTAAACTCTTCAGATTGATTTTTCTCCCACTATTTAAATACGGGGCTTTTGGGTCAACCAAAGTCTACAATTCTGAATTCTGATCACAACCACAAGCATTATTATGTTGGCTTTACCAAGGTGAAGTTGCGGGAAACAAACACACCATGTGCCATGTGATTGAAAGCCTGTAAAAGATAGCTGAGATGATTGTGGATATGTGTATATACTTGTGCTCTGCGGTTATAAGGTGAAGATTTGGTTGGTGCACCACGAGGCAGTACTGAATACTGATTGGGTCCATGTGCTAGTGTGGGAGCCTCTCGCTTCCGGTAGTATTATTTTTCCCTTGTAAGCTGCATTCATAGCGATTCAATTTCTTTCTTCCTGTAAGAAACTTCCCAAGATAAAAAGGTTCAGGCATATTAAATTTCAGTCATTTTGGTTCTCCCTTATTCATGCCGTGAGGCTTTTGGTTTCTACATTGAATTCTTTTGGGAGAAATAATGCATACCATATTTTTGGATTGATTGTAAATTATGAAGATAAAGTTCAGAGAATATTGATATTATTTGAATTGTTTAAAGAGT 3218 0.4195 MGLVGGEVRVSPSSSVFFTSAFKSSTTENSSNLLQGREPKLSAAFYFSTMCNVLPFLLCFLIASATASVSYDSKAITINGQRRILISGSIHYPRSTPEMWPDLIKKAKDGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFLKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKYIPGISFRTDNEPFKYQMLKFTTKIIDLMKAERLYETQGGPIIMSQIENEYGPIEYEIGAAGKAYSKWAADMAIGLGTGVPWVMCKQDDTPDPLINTCNGFYCDYFSPNKAYKPKMWTEAWTGWFTEFGGPVPHRPAEDLAFSVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAIKLCEPALVSGDPTVTKIGNYQEAHVFNSKSGACAAFLANYNPKSYATVAFGNMHYNLPPWSISILPDCKNTVYNTARVGSQSAQMKMTRIPIHGGLSWQSFNEETTTIDDSSFTMTGLLEQLNTTRDLSDYLWYSTDVVVDPSEGFLRNGKDPVLTVFSAGHALHVFINGTVYGSLEFPKLTFSEGVKLRAGVNKISLLSVAVGLPNVGPHFETWNAGVLGPISLSGLNEGRRDLSWQKWSYKVGLRGEILSLHSLSGSSSVEWIQGSLVSQRQPLTWYKTTFDAPVGTAPLALDMNSMGKGQVWLNGQNLGRYWPAYKASGTCDYCDYAGTYNENKCRSNCGEASQRWYHVPHSWLKPTGNLLVVFEELGGDPNGIFLVRRDIDSVCADIYEWQPNLISYQMQTSGKGPVRPKVHLSCSPGQKISSIKFASFGTPVGSCGNFHEGSCHAHKSYDSFERNCVGQNWCTVTVSPENFGGDPCPNVLKKLSVEAICS 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03555 876 PANTHER BETA-GALACTOSIDASE RELATED 63 779 IPR001944 GO:0004553|GO:0005975
Pste3g03555 876 Pfam Glycosyl hydrolases family 35 76 380 IPR031330 -
Pste3g03555 876 FunFam Beta-galactosidase 64 384 - -
Pste3g03555 876 SUPERFAMILY Galactose-binding domain-like 619 784 IPR008979 -
Pste3g03555 876 PRINTS Glycosyl hydrolase family 35 signature 79 96 IPR001944 GO:0004553|GO:0005975
Pste3g03555 876 PRINTS Glycosyl hydrolase family 35 signature 291 306 IPR001944 GO:0004553|GO:0005975
Pste3g03555 876 PRINTS Glycosyl hydrolase family 35 signature 212 227 IPR001944 GO:0004553|GO:0005975
Pste3g03555 876 PRINTS Glycosyl hydrolase family 35 signature 100 118 IPR001944 GO:0004553|GO:0005975
Pste3g03555 876 PRINTS Glycosyl hydrolase family 35 signature 348 364 IPR001944 GO:0004553|GO:0005975
Pste3g03555 876 PRINTS Glycosyl hydrolase family 35 signature 328 343 IPR001944 GO:0004553|GO:0005975
Pste3g03555 876 PRINTS Glycosyl hydrolase family 35 signature 155 174 IPR001944 GO:0004553|GO:0005975
Pste3g03555 876 PRINTS Glycosyl hydrolase family 35 signature 655 669 IPR001944 GO:0004553|GO:0005975
Pste3g03555 876 PRINTS Glycosyl hydrolase family 35 signature 682 698 IPR001944 GO:0004553|GO:0005975
Pste3g03555 876 Gene3D - 635 769 - -
Pste3g03555 876 Pfam Galactose binding lectin domain 798 875 IPR000922 GO:0030246
Pste3g03555 876 FunFam Beta-galactosidase 487 620 - -
Pste3g03555 876 FunFam Beta-galactosidase 333 461 - -
Pste3g03555 876 CDD Gal_Rha_Lectin_BGal 790 875 - -
Pste3g03555 876 Gene3D Glycosidases 62 384 - -
Pste3g03555 876 ProSiteProfiles SUEL-type lectin domain profile. 790 876 IPR000922 GO:0030246
Pste3g03555 876 Gene3D - 786 876 IPR043159 -
Pste3g03555 876 Pfam Beta-sandwich domain in beta galactosidase 388 459 IPR041392 -
Pste3g03555 876 FunFam Beta-galactosidase 785 876 - -
Pste3g03555 876 FunFam Beta-galactosidase 628 769 - -
Pste3g03555 876 SUPERFAMILY Galactose-binding domain-like 443 610 IPR008979 -
Pste3g03555 876 SUPERFAMILY (Trans)glycosidases 69 385 IPR017853 -
Pste3g03555 876 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 214 226 IPR019801 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03555 Pste-Chr3 27955309 27964684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03555 56 876 Glycoside Hydrolase AT3G13750 79.565 0.0 1417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03555 3 27955309 27964684 Pste3g03555 3 27955309 27964684 ECH
Pste3g03555 3 27955309 27964684 Pste6g01002 6 4033094 4039407 PCT