Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03335 GAGAGATGATGGGGGATGGTGGAAAGAAGAGAAGGTGAAGAGTAACAGTAACAGTAACAGTGACAGTGTAAGTATTTGATGTGATTTGGATGGAGTGGGGGGAGTCATTGTGATGGGATGGGTCAGAGGCTTAGTTGCGGAGGGGAGCAGGGGCAAGGGCTCTTGACCGCCGTGCAGCAGGGCCACCTCCAAATTGCCACAGCTCTCTTGGACTCCCATCCCTCTCTCTTACACCAAACAAGTCTCTACCATCGCCACTCCCCTCTTCATATTGCCGCCGCCAATGCCAGGATCCAGATTCTCTCCTCTCTTTTACATCGATCTCTTCCCCCTGATCTCTTAAATCGCCACAACCAGACCCCGCTTATGTTGGCAGCAATGCACGGGAACATCGCCTGTGTCCAGAAGCTTCTTCAAGCCGGAGCTAATGTTTTGATGTTTGATACTATTTACGGAAGAACCTGTTTACACTATGCCGCATACCACGGCCATTCTTCTTGCCTTCAGGCTATTCTTTCTGCTGCTCAATCTAGTCCCGTCGCTGCTTCTTGGGGCTTTGCTCGCTTTGTCAATATTAGAGATGGCAAGGGTGCAACCCCATTGCACTTGGCTGCTCGTCGGAGACGCTCTGAATGTCTACATATTCTATTAGACAGTGGAGCTCTTGTTTCTGCTTCTACTGCTACATATGGCTCTCCTGGGAGCACGCCGCTTCATCTAGCAGCCCAAGGAGGATCTCTCGATTGCATTCGCGAATTACTAGCATGGGGTGCAGATCGTCTTCAACGTGATGCATCTGGGCGGATACCATATATGCTTGCTCTGAAACACAAACATGGAGCCTGTGCATCACTGCTAGATCCTACATCTGCAGAACCTCTTGTCTGGCCGTCTCCATTGAAGTTCATCAGTGAGCTTAATCCTGAAGCCAAAGCCTTGTTAGAACAGGCACTGATGGATGCAAACAGACAAAGAGAGAAAAACATACTGAAAGGGAGTGCTCACTCTCTTCCATCTCCATCACATTCCAATGAGGTAGTTGAAGATGTGTCAGAGGTTAGTGAATCCGAATTATGTTGCATCTGCTTTGAGCAGGTATGTTCAATTGAAGTTCAGAACTGTGGCCACCAGATGTGTGCACAATGCACACTAGCCCTGTGTTGCCACAACAAGCCTAATCCTGCTACCGCCTGTCTTACTCCACCAGTCTGTCCATTTTGTCGAAGCACCATAACAAGACTCGTGGTTGTGAAGACAGAATGCCATGATGAAACCGATCAAGATGGTGTTGATATCAACTGTTCCAAGCTGAGCAAGTCATCAAGGAAGCTCAGAAACTTGAATGACAGTGGTAGCAGCAGCTTCAAGGGATTGGCCAGTGTTAGTTCACTCGGGAAGTTAGGTGGCCGCAGTTCTGGAAGGATTGCTGCTGAGTGGGTTGATAAACAGTGATGGCAATTAGTTGTGGTAATCAATGATTCCATATTGGCAAGATACGGTAACTACGTAGGTGCTTAACCGGCAAGGCAAAAGCAAAGTTAAAAAGGCGAAGGAATATTATGTAATTTTGGGAAATAAGCAAAGTGAGTTGAAGTGAAGTTCGCGGTAAGGTACCAAGTGTTGTTGGGGAAAACAGAAGGGGATGTCATGTTGTAGTATTATTATTACTTGAGAATGAAGAAGTATCACCCGCATCGATGATTTTGGGCACTGTCAATAATTTTATTATTATACGTATACTAGTAAAGTGGGAATAATTTCTCTCGAAAGTATAAGAATAATGTATTGCTTATTTGCGTCGGGTTTATTTCTTTGTACCGATATGATGTGAGCAATAAGATACAAAAGAGAAAGACAAAACCTTGCGTTGCTTGTCATCTGATCATGTCTCCG 1893 0.4591 MGQRLSCGGEQGQGLLTAVQQGHLQIATALLDSHPSLLHQTSLYHRHSPLHIAAANARIQILSSLLHRSLPPDLLNRHNQTPLMLAAMHGNIACVQKLLQAGANVLMFDTIYGRTCLHYAAYHGHSSCLQAILSAAQSSPVAASWGFARFVNIRDGKGATPLHLAARRRRSECLHILLDSGALVSASTATYGSPGSTPLHLAAQGGSLDCIRELLAWGADRLQRDASGRIPYMLALKHKHGACASLLDPTSAEPLVWPSPLKFISELNPEAKALLEQALMDANRQREKNILKGSAHSLPSPSHSNEVVEDVSEVSESELCCICFEQVCSIEVQNCGHQMCAQCTLALCCHNKPNPATACLTPPVCPFCRSTITRLVVVKTECHDETDQDGVDINCSKLSKSSRKLRNLNDSGSSSFKGLASVSSLGKLGGRSSGRIAAEWVDKQ 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03335 444 ProSiteProfiles Ankyrin repeat region circular profile. 157 182 - -
Pste3g03335 444 PANTHER ANKYRIN REPEAT CONTAINING 15 135 - -
Pste3g03335 444 ProSiteProfiles Ankyrin repeat profile. 78 110 IPR002110 GO:0005515
Pste3g03335 444 SMART ANK_2a 112 142 IPR002110 GO:0005515
Pste3g03335 444 SMART ANK_2a 157 186 IPR002110 GO:0005515
Pste3g03335 444 SMART ANK_2a 227 256 IPR002110 GO:0005515
Pste3g03335 444 SMART ANK_2a 78 107 IPR002110 GO:0005515
Pste3g03335 444 SMART ANK_2a 45 74 IPR002110 GO:0005515
Pste3g03335 444 SMART ANK_2a 194 223 IPR002110 GO:0005515
Pste3g03335 444 ProSiteProfiles Zinc finger RING-type profile. 320 369 IPR001841 -
Pste3g03335 444 ProSiteProfiles Ankyrin repeat region circular profile. 78 105 - -
Pste3g03335 444 Pfam Ankyrin repeats (many copies) 195 235 IPR002110 GO:0005515
Pste3g03335 444 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 300 378 IPR013083 -
Pste3g03335 444 ProSiteProfiles Ankyrin repeat profile. 194 226 IPR002110 GO:0005515
Pste3g03335 444 Gene3D - 146 197 IPR036770 -
Pste3g03335 444 ProSiteProfiles Ankyrin repeat region circular profile. 194 220 - -
Pste3g03335 444 Pfam Ankyrin repeats (3 copies) 83 184 IPR002110 GO:0005515
Pste3g03335 444 Gene3D - 9 145 IPR036770 -
Pste3g03335 444 SUPERFAMILY Ankyrin repeat 15 249 IPR036770 -
Pste3g03335 444 ProSiteProfiles Ankyrin repeat profile. 157 189 IPR002110 GO:0005515
Pste3g03335 444 Gene3D - 198 251 IPR036770 -
Pste3g03335 444 ProSiteProfiles Ankyrin repeat profile. 45 77 IPR002110 GO:0005515
Pste3g03335 444 SUPERFAMILY RING/U-box 314 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03335 Pste-Chr3 26137405 26140677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03335 14 225 Miscellaneous Gene Families AT3G12360 31.674 2.45e-15 76.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03335 3 26137405 26140677 Pste3g03335 3 26137405 26140677 ECH
Pste3g03335 3 26137405 26140677 Pste1g02328 1 8030525 8031070 PCT