Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02328 ATGTTGCTTCATTGCCTTTTCAACCATTTAGACCCCCTTATGTTGGCTGCAATGCACGGAAAGATCTCCTGTGTGGAAAAGCTCCTTCAAGCCGGTGCTAATGTATTAATGTTTGATGCGTGTTACGGAAGAACCTGCCTGCACTATGCAGCTTACTATGGCCATTCTTCTTGCCTTAAAGCAATTCTTTCTGCTGCTCAATCTAGTCCAGTGGCTGCTTCTTGGGGGTTTGCTCGGTTTGTGAATATTAGAGATGGTAGGGGTGCAACACCATTGCATTTGGCAGCCCGTCAAAGACGGCCTGACTGTGTACATATTCTATTGTACAGTGGAGCTCTTGTTTCGGCTTCAACTGGAAGATATGGGTAA 369 0.458 MLLHCLFNHLDPLMLAAMHGKISCVEKLLQAGANVLMFDACYGRTCLHYAAYYGHSSCLKAILSAAQSSPVAASWGFARFVNIRDGRGATPLHLAARQRRPDCVHILLYSGALVSASTGRYG 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02328 122 ProSiteProfiles Ankyrin repeat profile. 8 40 IPR002110 GO:0005515
Pste1g02328 122 ProSiteProfiles Ankyrin repeat region circular profile. 87 112 - -
Pste1g02328 122 SUPERFAMILY Ankyrin repeat 9 119 IPR036770 -
Pste1g02328 122 PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED 12 118 - -
Pste1g02328 122 Gene3D - 2 122 IPR036770 -
Pste1g02328 122 ProSiteProfiles Ankyrin repeat region circular profile. 8 35 - -
Pste1g02328 122 ProSiteProfiles Ankyrin repeat profile. 87 119 IPR002110 GO:0005515
Pste1g02328 122 Pfam Ankyrin repeats (3 copies) 13 114 IPR002110 GO:0005515
Pste1g02328 122 SMART ANK_2a 87 116 IPR002110 GO:0005515
Pste1g02328 122 SMART ANK_2a 42 72 IPR002110 GO:0005515
Pste1g02328 122 SMART ANK_2a 8 37 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02328 Pste-Chr1 8030525 8031070 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02328 12 108 Miscellaneous Gene Families AT3G12360 32.990 1.52e-08 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03335 3 26137405 26140677 Pste1g02328 1 8030525 8031070 PCT