Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03310 ATGGAGATTGATCTTTCTCCGCGGTTGGCAAAGAAAGTTTACGGAGGAAATGGTGGGTCCCAGTACGCATGGTCCCCCTCTGAGCTTCCGATGCTTGGCGAAGCTAACATTGGTGCAGCCAAGCTGGGTCTAAACAAAAACGGTTTCGCCCTTCCCCGTTACTCTGACTCTTCGAAAGTCGCTTATGTTCTCCAAGGAAGTGGAGTGGCTGGAATAGTGCTGCCAGAATCTGAAGAAAGGGTTTTAGCAATAAAGAAGGGTGATGCCTTGGCACTGCCCTTTGGTGTTGTGAGCTGGTGGTATAACAAGGAAGAAACCGAGTTGGTTGTTCTGTTTGTTGGGGACACTTGCAAGGCTCACAAGGCTGGTGAATTCACTGAATTTTTTTTGACTGGTCCCAATGGAATCTTCACTGGCTTTTCAACTGAGTTTGTGGGGAGGGCTTGGGACCTGGAAGAGAGTGATGTCCAGACCCTTGTTGGAAAACAAGCAGGGAAAGGGATTGTGCAGCTTGAGCTGGAAGGAAACATGGAGCCTAAACCGGAGCACCGGAATGGCATGGTTTTGAATTGCGAAGAGGCTCCATTGGATGTTGACATCACCGGTGGTGGAAGGGTTGTGGTATTGAACACCAACAATCTCCCCTTGGTTGGTCGGGTTGGACTCGGGGATGACCTTGTAAGGTTGGATGGAAGAGCCATGTGTTCTCCAGGCTTCTCTTGTGATTCTGCTTTCCAGGTTACTTACATTGTCAGGGGTAGTGGCCGGCTTCAAATTGTTGGTCTTGATGGCTGTCGGGTTTTGGATACAACCGTCCAAGCTGGTCATTTGTTCATTGTTCCAAGGTTTTTTGTCGTCTCAAAGATTGCTGATCCTCATGGACTCGACTGGTTCTCTATCATCACCACCCCTAATCCAATATTTACCCACTTGGCTGGAAGTTCTTCTGTGTGGAAAGCTTTATCGCCAACAGTTCTGCAGGCTGCTTTCAATGTAGATCCAGGAGTTGAGCAACTGTTCCGTTCAAAGAGGACTGCCGATGCCATTTTCTTCCCTCCGCCAAATTAGAATAAACATTCCATTGCTTTTCTCCTAAGGATTCCTCATTCTCATCTCGTCTTATCTGGACGAAAAATAAACAAAAAGGGATGTGTTTCACAAATTTGTTTGATTTTCGACTTTCCAGCAACCCTCACTATCAAAGTTCATTGGCATCTTGTAATTGTAAACAATAATCGTTTAAGTAATCAATTAAACAACAGCTAGAAAAAAATATAAT 1279 0.4574 MEIDLSPRLAKKVYGGNGGSQYAWSPSELPMLGEANIGAAKLGLNKNGFALPRYSDSSKVAYVLQGSGVAGIVLPESEERVLAIKKGDALALPFGVVSWWYNKEETELVVLFVGDTCKAHKAGEFTEFFLTGPNGIFTGFSTEFVGRAWDLEESDVQTLVGKQAGKGIVQLELEGNMEPKPEHRNGMVLNCEEAPLDVDITGGGRVVVLNTNNLPLVGRVGLGDDLVRLDGRAMCSPGFSCDSAFQVTYIVRGSGRLQIVGLDGCRVLDTTVQAGHLFIVPRFFVVSKIADPHGLDWFSIITTPNPIFTHLAGSSSVWKALSPTVLQAAFNVDPGVEQLFRSKRTADAIFFPPPN 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03310 355 Pfam Cupin 198 334 IPR006045 -
Pste3g03310 355 Pfam Cupin 11 156 IPR006045 -
Pste3g03310 355 Gene3D Jelly Rolls 192 355 IPR014710 -
Pste3g03310 355 PRINTS 11-S seed storage protein family signature 210 230 IPR006044 GO:0045735
Pste3g03310 355 PRINTS 11-S seed storage protein family signature 315 332 IPR006044 GO:0045735
Pste3g03310 355 PRINTS 11-S seed storage protein family signature 257 273 IPR006044 GO:0045735
Pste3g03310 355 PRINTS 11-S seed storage protein family signature 293 311 IPR006044 GO:0045735
Pste3g03310 355 PRINTS 11-S seed storage protein family signature 275 290 IPR006044 GO:0045735
Pste3g03310 355 CDD cupin_11S_legumin_N 4 172 - -
Pste3g03310 355 Gene3D Jelly Rolls 8 179 IPR014710 -
Pste3g03310 355 SMART Cupin_1_3 194 338 IPR006045 -
Pste3g03310 355 SMART Cupin_1_3 3 157 IPR006045 -
Pste3g03310 355 PANTHER OS03G0336100 PROTEIN-RELATED 10 354 - -
Pste3g03310 355 CDD cupin_11S_legumin_C 197 352 - -
Pste3g03310 355 SUPERFAMILY RmlC-like cupins 16 344 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03310 Pste-Chr3 25787725 25789358 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03310 3 25787725 25789358 Pste3g03310 3 25787725 25789358 ECH
Pste3g03310 3 25787725 25789358 Pste1g02403 1 8475542 8478175 PCT