Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02403 TTTAGATTGCTATATATACACAGCAAAGGTGTGGGACTGTGATCATCATTGATATTTGTGGTGTGTTGTGATGGAGATTCATCTTTCTCCCCAGTTGGCCAAGAAGGTCTATGAAGGCAATGGTGGGTCTTACTATGCATGGTCGCCTTCTGAGCTTCCCATGTTGCGTGAAGGGAACATTGGTGCTGCCAAACTAGCTCTTCAAAAAAATGGTTTTGCCCTTCCTCATTATTCTGACTCTTCCAAGGTTGCATATGTTCTGCAAGGAAGTGGAGTTGTTGGAATTGTGCTCCCTGAATCAGAAGAGAAGGTTGTTGCAATTAAGAAGGGTGATGCTTTGGCACTCTCTTTTGGTGTGGTGACATGGTGGTATAATAAGGAGGAAACGGAGTTGGTAGTTCTGTTCTTGGGTGACACTTCAAAAGCCCACAAGACTGGTGAATTTACTGATTTTTTTCTGACTGGTTCCAATGGAATCTTCACTGGATTTTCAACAGAGTTTGTGAGCAGGGCTTGGGACTTGGAAGAGAAGGATGTGAAGACCCTTGTTGGAAATCAATCAGCGAAAGGTATTGTAAAGCTTGAAGGGAATATCAACCTTCCTGAGCCCAAAGAGGAACATAGGAAGGGCATGGCACTGAACTGTGAAGAGGCTCCTTTGGATGTTGACATTAAGAATGGTGGAAGGGTTGTGGTCTTGAACACCAAGAATCTTCCCTTGGTTGGTGAGGTTGGTCTAGGAGCAGACCTTGTGAGACTGGATGGAAAAGCCATGTGTTCTCCTGGATTTTCCTGTGATTCTGCTCTTCAGGTTACTTACATTGTCAGAGGAAGTGGTCGTGCTCAGATTGTTGGCCCTGATGGTCGCAGGGTTTTGGAGACAACTGTGAAAGCTGGTAATTTGTTCATCGTGCCAAGGTTTTTTGTCGTCTCAAAGATTGCTGACTCTGATGGACTGGAGTGGTTCTCTATCATCACTACTCCCAATCCTGTATTTACACACCTGGCTGGAAGTATTGGGGCGTGGAAGGCTCTTTCACCAACAGTTCTACAGGCTGCTTTCAACGTAGACCCAAGAGTTGAGCAACTCTTCCGTTCAAAGAGGAGTGCTGATGCCATTTTTTTCCCACCTCCAAATTAAAGCACCACATAAATAGTACTTGGTTTATGTTTCTTTTGAATTAGTAGTTTCGGGTTTTGAATTAGTTTTAAATTTCTAATGGAGTACTTTTTAAGTTTATAAATTTCTTTTGGC 1255 0.4335 MEIHLSPQLAKKVYEGNGGSYYAWSPSELPMLREGNIGAAKLALQKNGFALPHYSDSSKVAYVLQGSGVVGIVLPESEEKVVAIKKGDALALSFGVVTWWYNKEETELVVLFLGDTSKAHKTGEFTDFFLTGSNGIFTGFSTEFVSRAWDLEEKDVKTLVGNQSAKGIVKLEGNINLPEPKEEHRKGMALNCEEAPLDVDIKNGGRVVVLNTKNLPLVGEVGLGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGRRVLETTVKAGNLFIVPRFFVVSKIADSDGLEWFSIITTPNPVFTHLAGSIGAWKALSPTVLQAAFNVDPRVEQLFRSKRSADAIFFPPPN 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02403 356 Gene3D Jelly Rolls 3 196 IPR014710 -
Pste1g02403 356 SUPERFAMILY RmlC-like cupins 11 345 IPR011051 -
Pste1g02403 356 CDD cupin_11S_legumin_N 4 173 - -
Pste1g02403 356 Gene3D Jelly Rolls 197 356 IPR014710 -
Pste1g02403 356 CDD cupin_11S_legumin_C 198 353 - -
Pste1g02403 356 Pfam Cupin 10 156 IPR006045 -
Pste1g02403 356 Pfam Cupin 199 338 IPR006045 -
Pste1g02403 356 PRINTS 11-S seed storage protein family signature 316 333 IPR006044 GO:0045735
Pste1g02403 356 PRINTS 11-S seed storage protein family signature 294 312 IPR006044 GO:0045735
Pste1g02403 356 PRINTS 11-S seed storage protein family signature 258 274 IPR006044 GO:0045735
Pste1g02403 356 PRINTS 11-S seed storage protein family signature 276 291 IPR006044 GO:0045735
Pste1g02403 356 PRINTS 11-S seed storage protein family signature 211 231 IPR006044 GO:0045735
Pste1g02403 356 SMART Cupin_1_3 195 339 IPR006045 -
Pste1g02403 356 SMART Cupin_1_3 3 157 IPR006045 -
Pste1g02403 356 PANTHER OS03G0336100 PROTEIN-RELATED 5 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02403 Pste-Chr1 8475542 8478175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02403 35 333 Miscellaneous Gene Families AT2G18540 21.490 7.05e-07 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03310 3 25787725 25789358 Pste1g02403 1 8475542 8478175 PCT