Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03255 TGATTATTACACTAATTAAGAAACTATGGGAAGTAGAGTAACCCTTTTGATTTTGTTCCTTGTTCTTTGTAATGGTGTGGCACTAACAATGGGTTTCTGGAGGACAAAGGGGGAAGATAAAGAAGAGGAACCTCTAAGTTCAGACAAATTGTTTTTGATGATGAAATCCAAGCATGTGGCCAAAACTGACGCTGGGGAGATGCGAGTGCTTGAAAGCTATGGTGGTGGGAATTCAGATAGGCGCTTGAACATTGGTTTCATCACTATGGAACCAAGGTCCCTCTTCATTCCTCAATACCTCGACTCCACTTTGATCATATTCGTGCGTTCAGGGGAAGCAAAAGTGGGATTCGTATATAAAGACAAGTTAGCAAAAAGGCATTTGAAGATGGGAGATGTATATCAAATTCCGGCAGGTTCTACTTTTTATCTAGTGAACATAGAGGAGAGTCAAAAGCTTCACATTATTTGCAGTATTGACCCCTCTGAGAGTTTGGGAATTGATGTTTTCCAGTCCTTCTACATTGGAGGAGGAGCCCATCCAGCCTCAGTACTTTCAGGATTTGAGCCTGAAATCCTTGAAAATGCTTTTAACGAATCGGGAGAAGAGTTGCAAAAATTATTTACTAGGCAACGTGAGGGCCCAATCGTGCATGTGGGTGATTCACATGCCACAAGCATATGGAACAACTTCCTTCAACTTAAGGAGGAAGACAAACTTGAGCACATTGTGGAAGAAGAAATTGGTGATGAAGAAGAGCAACAAAGAAATTGGTCATGGAGGAAGCTCTTGGAATCTGTATTTGGAGATGAGATCAAGGACACAAAGGAGAAGCGTACTAAAAAACCCCCTCACTCTTGCAACCTCTACGACAGAAAGCCTGATTTTGAAAACAACTATGGTTGGAGCGTTGCTGTAGATGGCTCTGATTATTCTCCGCTTAAAAGTTCTGGTGTTGGCATTTATCATGTCAATCTCTCAGCGGGATCAATGATGGCACCCCATGTGAATCCAAGGGCAACAGAGTATGGCATAGTGCTAAAGGGGACAGGTAGAATCCAAATAGTGTTTCCAAATGGAAGCAATGCAATGGACACACACATCAAAGAAGGGGATGTGTTCTTCATTCCAAGATACTTTGCCTTTTGCCAAATAGCATCAAGAAGTGAACCACTAGAGTTCTTTGGGTTCACCACCTCAGCTCAGAGGAATAAGCCACAATTTCTTGCTGGTGCCACGTCATTGATGAGGACCATGATGGGGCCCGAGCTTGCGGCTGCATTTGGGGTGAGCGAAGAGACCATGCGACGTGTGGTCAAGGCACAACATGAAGCTGTGATTCTACCAACTCCACGGGTTGCACCTGCACACACCCACAGGGAAGAGTTGTTGCTCCATGTTATTCCAAAGAATCACATGATTATGGGCTTTTGATTTTTCCTTTGCTAAATTATTTAGATCAACTTTTTTATAGTCTTAGCGAGAATAAGG 1492 0.4303 MGSRVTLLILFLVLCNGVALTMGFWRTKGEDKEEEPLSSDKLFLMMKSKHVAKTDAGEMRVLESYGGGNSDRRLNIGFITMEPRSLFIPQYLDSTLIIFVRSGEAKVGFVYKDKLAKRHLKMGDVYQIPAGSTFYLVNIEESQKLHIICSIDPSESLGIDVFQSFYIGGGAHPASVLSGFEPEILENAFNESGEELQKLFTRQREGPIVHVGDSHATSIWNNFLQLKEEDKLEHIVEEEIGDEEEQQRNWSWRKLLESVFGDEIKDTKEKRTKKPPHSCNLYDRKPDFENNYGWSVAVDGSDYSPLKSSGVGIYHVNLSAGSMMAPHVNPRATEYGIVLKGTGRIQIVFPNGSNAMDTHIKEGDVFFIPRYFAFCQIASRSEPLEFFGFTTSAQRNKPQFLAGATSLMRTMMGPELAAAFGVSEETMRRVVKAQHEAVILPTPRVAPAHTHREELLLHVIPKNHMIMGF 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03255 469 Pfam Cupin 51 195 IPR006045 -
Pste3g03255 469 Pfam Cupin 280 427 IPR006045 -
Pste3g03255 469 PANTHER OS03G0336100 PROTEIN-RELATED 6 443 - -
Pste3g03255 469 CDD cupin_7S_vicilin-like_N 51 211 - -
Pste3g03255 469 Gene3D Jelly Rolls 271 443 IPR014710 -
Pste3g03255 469 SUPERFAMILY RmlC-like cupins 50 437 IPR011051 -
Pste3g03255 469 Gene3D Jelly Rolls 31 221 IPR014710 -
Pste3g03255 469 CDD cupin_7S_vicilin-like_C 286 437 - -
Pste3g03255 469 SMART Cupin_1_3 49 197 IPR006045 -
Pste3g03255 469 SMART Cupin_1_3 279 428 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03255 Pste-Chr3 25188021 25190513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03255 4 446 Miscellaneous Gene Families AT2G18540 28.160 9.95e-47 170
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03255 3 25188021 25190513 Pste3g03255 3 25188021 25190513 ECH
Pste3g03255 3 25188021 25190513 Pste1g02554 1 9566590 9569336 PCT