Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02554 ATGACAAATAAAAGCACCCTTTTGCTCTTGCTTTTTGTTCTGTTGCATGGAGTGGCCTTAACAATGGCCTTCTTTGAAGGTGAAGAAGATTGGTGGTCAGAGTCACCAAATAGTTTGTTCTTGATGCGCAAATCCAAGAGAGTGATCAAGACTGATGCAGGAGAAATGCATGTACTGAAAAGCCATAGCGGTAGAATTTTTGGTAGGCACATGCACATTGGATTCATCACTATGGAGCCAAAGTCCTTGTTCGTTCCTCAATACCTTGACTCTAACCTCATCGTATTCATCCGTAGAGGGGAAGCAAAGTTGGGATTCATATATGATGATGAACTAGTGGAAAGGCGATTGAAGACAGGGGACGTGTATATGATTCCAGCAGGCACAGCATTCTATTTTGTGAATACTGGAGAAGGACAGAGACTTCACATCATCTGCAGTATTGATCCTTCTACAAGTTTGGGATTAGATTCCTTTCAGTCCTTCTATATTGGAGGAGGAGCCAATTCACACTCAGTGCTTTCTGGATTCGAACCTTGGATCCTTGAAACTGCATTTAATGAATCAAGACTGGAGGTAGAGAAAGTCTTCTCCAAAGAACTAGATGGGCCAATTATGTTCTTAGGTGATTCCTATGCACCTAGCTTACAGACTAAATTCCCTCAACTGAAGAAGGAAACCAAAGAGCAACAGCTAAAGAAAATGGTGCAACACAAAGAAGAAGATGAAGACGAAGAAGAAAAGCAAACAAGTAGATCATGGAGGAAGCTCTTGGAAACTGTTTTCGGGAAGGCAAATGAGAAGACAGAGAACAAAGACACTGCTGATCCCCCTGACTCTTACAATCTTTATCATGACAAAGAACCTGATTTCAGAAATGCTTATGGTTGGAGCAAGGCACTGCATGGAGGCGAGTATCCTCCACTCAGCGAACCTGACATTGGCATTTTCCATGTCAAACTATCAGCGGGATCCATGATGGCACCTCATATGAATCCGAGAGCAAGTGAGTATGGGATTGTGCTGGATGGTCATGGTAAACTTTTTATACTGTTTCCAAACGGAAGCATAGCAATGAACAGTGAAATAAAAAAAGGGGACGTGTTTGTTGTGCCAAGATACTTCCCCTTCTGTCAAATAGCATCAAGGGATGGACCCTTAGTGTTCTTTGGGTTCTCCACCTCTGCCATGAAGAACAAGCCACAGTTTCTGGCAGGTGCTGTGTCCCTTCTTAGGACCTTGTTGGGGCCTGAGCTTGCGGCAGCATTAGGGATAAGTGAGGAGACGTTACGCCGCCTGGTGGAACCTCAGCATGAGGCTGTGATCCTGCCATCAGCCTGGGTTGCACCACCTGAAGATGCAGGGAAGAACACGGTGCACATGCTTCCCAAGGCTAGAAGCTTTGCCAATCATGTACTTATGGATGTTTTTTAA 1434 0.4428 MTNKSTLLLLLFVLLHGVALTMAFFEGEEDWWSESPNSLFLMRKSKRVIKTDAGEMHVLKSHSGRIFGRHMHIGFITMEPKSLFVPQYLDSNLIVFIRRGEAKLGFIYDDELVERRLKTGDVYMIPAGTAFYFVNTGEGQRLHIICSIDPSTSLGLDSFQSFYIGGGANSHSVLSGFEPWILETAFNESRLEVEKVFSKELDGPIMFLGDSYAPSLQTKFPQLKKETKEQQLKKMVQHKEEDEDEEEKQTSRSWRKLLETVFGKANEKTENKDTADPPDSYNLYHDKEPDFRNAYGWSKALHGGEYPPLSEPDIGIFHVKLSAGSMMAPHMNPRASEYGIVLDGHGKLFILFPNGSIAMNSEIKKGDVFVVPRYFPFCQIASRDGPLVFFGFSTSAMKNKPQFLAGAVSLLRTLLGPELAAALGISEETLRRLVEPQHEAVILPSAWVAPPEDAGKNTVHMLPKARSFANHVLMDVF 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02554 477 Gene3D Jelly Rolls 285 449 IPR014710 -
Pste1g02554 477 PANTHER OS03G0336100 PROTEIN-RELATED 4 445 - -
Pste1g02554 477 CDD cupin_7S_vicilin-like_C 289 440 - -
Pste1g02554 477 SUPERFAMILY RmlC-like cupins 31 440 IPR011051 -
Pste1g02554 477 SMART Cupin_1_3 40 194 IPR006045 -
Pste1g02554 477 SMART Cupin_1_3 281 431 IPR006045 -
Pste1g02554 477 Coils Coil 225 249 - -
Pste1g02554 477 Pfam Cupin 44 146 IPR006045 -
Pste1g02554 477 Pfam Cupin 286 429 IPR006045 -
Pste1g02554 477 Gene3D Jelly Rolls 33 258 IPR014710 -
Pste1g02554 477 MobiDBLite consensus disorder prediction 227 252 - -
Pste1g02554 477 CDD cupin_7S_vicilin-like_N 48 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02554 Pste-Chr1 9566590 9569336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02554 8 452 Miscellaneous Gene Families AT2G18540 28.632 1.01e-40 153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03255 3 25188021 25190513 Pste1g02554 1 9566590 9569336 PCT