Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03112 AATAATAAAAATAAAAAAGAAGAAATGATGGAAGACAAGGTTACTTTACGTAATGCCATAGTTGAAAGTGGAAATTGTGTGTTGTGTCTGGGAAACTTACCTCTTCTAACTTGTCTTCCCTCTCCCAAGTCCCAAACAAACTTCATTACAAATACACATTCCACATTCGGCATTCGGCATTCGGCATTGCTCCCTCTCTCTTATTATTGACATACTCTTTTCTCGCGCGCATTAGTGTTTCAACTTCCAATTCCCATTCCCAGACACACACATACGACGTACACGTACACATATACGTTAACACGTACGATAAGCTAAATCCTAGATATAGTCAAAACTGATTAATTACTATACGACACGAATGGCGGCTGCCTTCGTTATCTCCGTCGTGCTGTTGGCGGCGGTTACTCTCGGATCGCCGCCCACTCTGACGCTGGAAAGAGCGTTTCCTACCAATCACCGAGTGGAGCTGAGTCAGCTCAGAGCTCGCGACGCGTTGAGGCACCGCAGCATGTTGCAGTCTTCAAACGGCGTCGTCGATTTCTCCGTCCAAGGCACCTTCGATCCCTTCCAAGTCGGGCTCTACTATACAAAAGTGCAGTTGGGTACTCCGCCAGTAGAATTTAATGTGCAGATTGACACTGGCAGTGATGTTCTCTGGGTTAGTTGTAACTCCTGCAATGGTTGTCCTCAAACAAGTGGCCTTCAGATTCAGCTCAATTTTTTTGACCCTGGGAGTTCATCAACATCTTCATTGATCTCTTGTTCTGACCAAAGGTGCAGTAGTGGAATACAATCATCAGATGCCAGCTGTTCCAGTCAGAACAACCACTGCTCCTACACTTTCCAGTATGGAGATGGAAGTGGGACATCAGGCTATTACGTGTCAGATATGATGCATTTGAACACTATTTTTGAGGGATCTGTGACCACGAATTCGACAGCGCCTGTAGTTTTTGGCTGTAGCAACCAGCAGACTGGGGACTTGACAAAGTCGGATAGAGCAGTAGATGGGATATTTGGATTTGGGCAACAAGAAATGTCTGTCATTTCTCAGCTCTCCTCACAGGGGATTGCTCCAAGAGTATTCTCTCATTGTCTGAAAGGAGATAGCAGTGGTGGGGGCATATTGGTTCTTGGTGAGATTGTGGAGCCAAACATAGTTTACACTTCACTTGTTCCAGCACAGCCTCATTACAATTTAAATCTACAGAGCATTGCTGTCAACGGCCAGACATTGCAAATTGATTCATCAATTTTTGAGACATCAAACAACAGAGGTACCATTATTACAGCTACAATTCCACAATCTGTACGCACTGTTGTTTCCAAGGGAAACCAGTGTTACTTAATCACCTCCAGTGTCACTGACATTTTTCCTCAAGTAAGTCTGAACTTTGCTGGTGGGGCATCTATGATTTTAAGACCACAGGACTACCTGATACAGCAGAATTCTATTGGTGGGGCAGCAGTGTGGTGTATTGGCTTTCAGAAAATCCAGGGTCAAGGGGTAACAATTTTAGGAGATCTCGTATTAAAAGACAAAATTGTCGTTTATGATCTGGCTGGTCAACGCATTGGATGGGCTAACTATGACTGTTCTTTGTCGGTGAATGTCTCTGCATCAACTGGCACTGGCAGGAGTGAATTTGTGAATGCTGGAGAGATAGGTGGAAGCATTTCTTTAAGAGATGGACTTCAGTTGACAAAGACAGGGTTCCTGGCTTTCTTTGTGCATTTAACACTAATTTACTGCTTTGGATTTTTATAGCATTTATACATTGTGAGAGAGATTCTTCTTCGTATGTATATTCTTTTACCGGTATATATTCGTGACAGTCAGCAAAACCACATTAATTTTAATGTTGTTTGTGCCTCTCTCTGCACAATAAGCTTGTCTGGTTTATACTACTCAGGTGGATTATGTTGAACGCTATTAGTCATGTAGAATCAGATAATTACTCTTAACTTTCGGCAGTATTGTAGATTACTTCACAGGATTATTAATTGAAACGTACACATGTTATAAAATATACCTCCTGTGTCTTTCCCTGGT 2056 0.4261 MAAAFVISVVLLAAVTLGSPPTLTLERAFPTNHRVELSQLRARDALRHRSMLQSSNGVVDFSVQGTFDPFQVGLYYTKVQLGTPPVEFNVQIDTGSDVLWVSCNSCNGCPQTSGLQIQLNFFDPGSSSTSSLISCSDQRCSSGIQSSDASCSSQNNHCSYTFQYGDGSGTSGYYVSDMMHLNTIFEGSVTTNSTAPVVFGCSNQQTGDLTKSDRAVDGIFGFGQQEMSVISQLSSQGIAPRVFSHCLKGDSSGGGILVLGEIVEPNIVYTSLVPAQPHYNLNLQSIAVNGQTLQIDSSIFETSNNRGTIITATIPQSVRTVVSKGNQCYLITSSVTDIFPQVSLNFAGGASMILRPQDYLIQQNSIGGAAVWCIGFQKIQGQGVTILGDLVLKDKIVVYDLAGQRIGWANYDCSLSVNVSASTGTGRSEFVNAGEIGGSISLRDGLQLTKTGFLAFFVHLTLIYCFGFL 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03112 469 Gene3D Acid Proteases 53 261 IPR021109 -
Pste3g03112 469 PANTHER ASPARTYL PROTEASES 14 407 IPR001461 GO:0004190|GO:0006508
Pste3g03112 469 FunFam Aspartic proteinase-like protein 2 262 420 - -
Pste3g03112 469 FunFam Aspartic proteinase-like protein 2 58 261 - -
Pste3g03112 469 SUPERFAMILY Acid proteases 70 416 IPR021109 -
Pste3g03112 469 CDD pepsin_A_like_plant 75 413 IPR034161 -
Pste3g03112 469 Pfam Xylanase inhibitor N-terminal 75 260 IPR032861 -
Pste3g03112 469 Gene3D Acid Proteases 316 420 IPR021109 -
Pste3g03112 469 Gene3D Acid Proteases 262 315 IPR021109 -
Pste3g03112 469 PRINTS Pepsin (A1) aspartic protease family signature 81 101 IPR001461 GO:0004190|GO:0006508
Pste3g03112 469 PRINTS Pepsin (A1) aspartic protease family signature 385 400 IPR001461 GO:0004190|GO:0006508
Pste3g03112 469 Pfam Xylanase inhibitor C-terminal 322 409 IPR032799 -
Pste3g03112 469 ProSiteProfiles Peptidase family A1 domain profile. 75 409 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03112 Pste-Chr3 23939215 23944726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03112 49 414 Miscellaneous Gene Families AT1G44130 26.904 2.63e-37 139
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03112 3 23939215 23944726 Pste3g03112 3 23939215 23944726 ECH
Pste3g03112 3 23939215 23944726 Pste1g02768 1 11458812 11463777 PCT