Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02768 TGTTATTTGAGGGAAACTTGGAACCCTGCAAGTTGCAGAGGTTACAATTACAAGTTTACAACTCTCTTTCTTTTCTTCCTAGAATCACGCGATCATGAAGTACAGCAGCAACACCAATTTTTGGGCGGCGTTGCTTTTTGTTCTCATATTCCATTAGCCACAAACTCAATCCCGCTTCGCTTTCCCTTCTTCTCAACACTTTCCAACCGACACTGATGGAAGCCGTGGCAGCCGCTTTTCTCTTCGCCGCCGTCATTCTCTCGCCGGTTTCCGGTTCTCCTCCGGTGACTCTGACGCTGGAAAGAGCGTTTCCTTCAAATAATGGGATGGACTTGAGTCAGCTCAGAGCCAGGGACATCCTCAGACATCGTAGAATCTTGCAGTCTACTAGTTACGTTGTAGATTTCCCTGTCAAAGGCACCTTCGATCCCTCTCAAGTCGGGCTTTACTATACAAAGGTGAAATTGGGTACTCCTCCAAGGGAATTTTATGTGCAGATTGACACTGGCAGTGATGTTCTCTGGGTTAGTTGTGGGTCTTGCAATGGTTGTCCTCAGACAAGTGGGCTCCAAATTCAGCTCAATTACTTTGATCCAGTGAGTTCTTCAACATCTTCGTTGGTATCTTGTTCAGACCGAAGGTGCAGGAGTGGAGTACAGTCCTCGGATGCCAGCTGTTCCGGTCAGAACAACCAGTGCACTTACACATTCCAGTATGGAGATGGTAGTGGGACTTCAGGCTATTATGTGTCAGACTTGATGCATTTTGCTAGTATTTTTGAGGGAGCCTTGACAACAAATTCTTCAGCATCTGTAGTTTTTGGTTGTAGCATCCTGCAGACTGGGGACTTAACAAAGTCTGATAGAGCAGTTGATGGAATATTTGGATTTGGGCAACAAGGCATGTCTGTCATTTCCCAACTCTCATCACAAGGAATAGCGCCGAGAGTGTTCTCCCATTGCCTGAAAGGAGATCATAGGGGTGGGGGCGTATTGGTTCTAGGTGAAATTGTGGAGCCAAACATAGTTTTTAGTCCACTTGTTCCATCGCAGCCCCATTACAATTTAAATCTGCAGAGCATCTCTGTTAATGGTCAAATTTTGCAAATTAGTCCTCAAGTTTTTGCTACATCAAACAATAGAGGTACCATTGTTGATTCTGGAACAACTTTGGCGTACCTTGCAGAAGAGGCTTACAGTTCCTTTGTCAATGCGATTGCAGCCACTATTCCACCATATATACGCAGTGTTGTTTCCAGGGGAAATCAATGTTACTTAATAACCACCTCCAGCAATGTTGACATTTTTCCGCAAGTAAGTCTGAACTTTGCCGGTGGTGCATCTCTGGTTTTAAAACCATTGGACTACCTTTTGCAGGAGAGTTATATGGGCGAGGGATCAGTGTGGTGTCTTGGCTTTCAGAAAATTCCGGGTCAAAGTGTAACGATTCTAGGAGACCTCGTTTTAAAAGACAAAATTTTTGTGTACGATCTTGCTGGTCAACGTATTGGATGGGCTGACTATGATTGTTCGTTGCCGGTTAATGTATCTGCATCAGCTGGAAGGGGAAGAAGTGAGTTTGTGGACGCAGGAGAACTAAGTGGCAGCACTTGTTTACGTGATCGACCTCATATTTTGATAAAGACATTATTCCTTGCTCTCTTCATGCACATAACACTAATTTTGTAGCATGTGAAATTGGAACTGATATTCTTTTTTGCATATTCTCTTGCTGGTATATATTTGGTGCAATCGGCAGGACCACACGTTCTTACTTGGATTTGTAACTTGTGTTTTCATTCTGCACAATAGGGTTCTCCGTTTTAGCTTCAGGTGCCTATGTAGTCGCTTTTTTGTCAGCCATGTCTCTCAGGTTTTTTATTTTCTTGGTACATAGTATTGTAAATTTACATCATTATTGATTGAATCGCAGATACCACAGTTTTTCACAAACTCGATTCTTTGTTTACTTTTTCTA 1977 0.4315 MEAVAAAFLFAAVILSPVSGSPPVTLTLERAFPSNNGMDLSQLRARDILRHRRILQSTSYVVDFPVKGTFDPSQVGLYYTKVKLGTPPREFYVQIDTGSDVLWVSCGSCNGCPQTSGLQIQLNYFDPVSSSTSSLVSCSDRRCRSGVQSSDASCSGQNNQCTYTFQYGDGSGTSGYYVSDLMHFASIFEGALTTNSSASVVFGCSILQTGDLTKSDRAVDGIFGFGQQGMSVISQLSSQGIAPRVFSHCLKGDHRGGGVLVLGEIVEPNIVFSPLVPSQPHYNLNLQSISVNGQILQISPQVFATSNNRGTIVDSGTTLAYLAEEAYSSFVNAIAATIPPYIRSVVSRGNQCYLITTSSNVDIFPQVSLNFAGGASLVLKPLDYLLQESYMGEGSVWCLGFQKIPGQSVTILGDLVLKDKIFVYDLAGQRIGWADYDCSLPVNVSASAGRGRSEFVDAGELSGSTCLRDRPHILIKTLFLALFMHITLIL 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02768 490 Pfam Xylanase inhibitor N-terminal 78 263 IPR032861 -
Pste1g02768 490 PANTHER ASPARTYL PROTEASES 30 432 IPR001461 GO:0004190|GO:0006508
Pste1g02768 490 FunFam Aspartic proteinase-like protein 2 265 445 - -
Pste1g02768 490 Pfam Xylanase inhibitor C-terminal 281 434 IPR032799 -
Pste1g02768 490 Gene3D Acid Proteases 55 264 IPR021109 -
Pste1g02768 490 Gene3D Acid Proteases 265 443 IPR021109 -
Pste1g02768 490 PRINTS Pepsin (A1) aspartic protease family signature 311 322 IPR001461 GO:0004190|GO:0006508
Pste1g02768 490 PRINTS Pepsin (A1) aspartic protease family signature 410 425 IPR001461 GO:0004190|GO:0006508
Pste1g02768 490 PRINTS Pepsin (A1) aspartic protease family signature 84 104 IPR001461 GO:0004190|GO:0006508
Pste1g02768 490 FunFam Aspartic proteinase-like protein 2 61 264 - -
Pste1g02768 490 ProSiteProfiles Peptidase family A1 domain profile. 78 434 IPR033121 -
Pste1g02768 490 CDD pepsin_A_like_plant 78 438 IPR034161 -
Pste1g02768 490 SUPERFAMILY Acid proteases 75 440 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02768 Pste-Chr1 11458812 11463777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02768 52 439 Miscellaneous Gene Families AT1G44130 25.185 8.49e-35 132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03112 3 23939215 23944726 Pste1g02768 1 11458812 11463777 PCT