Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02905 ATGGCTACCACAGCATTTTCGCTCCTCCGAGCTTCTAGGTCCAAGCTTGCTTCCTCTTCCTCCTCCGCTTCTCTTTCTAGAACCTTCACTCGCTCCGCCACTCACCGATCCCTCGGCTCCTCTGCCGCCCGCTCCTTTGCCTCTGCCGTCCCGCGGTGGAGTCACGGCGTCGATTGGCGCTCTCCGCTCGGCCTCCGCCCTCAGATCAGAGCCGTCTCTCCCCTCATCGAACGCTTCCACCGTAGGATCGCCACTAGTGTTTCTCTAATGTTTGGCGCTGAATTTTGTGTTCTGAGTGACGTAAGTGCCATTGCAGCTGCTGAGAATCCTTTCAAGGGAAACCTGACTAGTCTCCCCAAGCCTGGTGGTGGCGAGTTTGGCAAGTTCTACAGCCTTCCGTCTCTCAACGATCCGAGAATTGATAGGTTGCCATACTCTATCAGAATTCTCCTTGAATCTGCCATTCGTAATTGTGACAATTTCCAAGTAACTAAAGGGGATGTTGAGAAGATTGTTGACTGGGAAAGCTCTTCTGTCAAGCAAGTTGAGATTCCTTTCAAGCCTGCTCGTGTTCTACTGCAGGATTTTACTGGAGTCCCGGCTGTTGTTGACCTGGCTTGCATGCGTGATGCTATGAATAAGCTTGGCAGTGATTCTAATAAGATCAATCCTCTGGTTCCTGTTGATCTTGTTGTTGATCATTCAGTTCAAGTCGATGTTGCAAGATCAGAGAATGCAGTGCAGGCCAATATGGAGCTTGAGTTCCAAAGAAACAAGGAGAGATTTGCTTTTCTAAAATGGGGGTCAAATGCTTTCCGCAATATGCTTGTTGTCCCTCCTGGTTCTGGTATAGTACATCAGGTCAATCTTGAATATTTGGGACGTGTTGTTTTCAACAATGAGGGCTTGCTCTATCCTGACAGCGTGGTTGGGACCGATTCACATACAACAATGATAGACGGGCTTGGAGTTGCTGGATGGGGTGTTGGAGGTATTGAAGCAGAGGCAGCAATGCTTGGCCAGCCTATGAGCATGGTGTTACCTGGTGTTGTTGGGTTCAAGTTATCTGGAAAATTACGCAATGGTGTTACAGCAACTGACTTGGTTCTAACTGTAACACAAATGCTTAGGAAACATGGTGTTGTAGGGAAATTTGTTGAATTTTATGGTGATGGTATGGGTGAGTTATCGTTAGCTGACAGGGCCACTATTGCCAATATGTCTCCTGAATATGGTGCAACCATGGGTTTCTTCCCTGTGGATCATGTTACATTACAATACCTCAAATTAACTGGAAGAAGTGATGAGACCGTGGCAATGATAGAGGCCTATCTTAGGGCAAACAAATTGTTTGTTGACTATAATGAGCCTCAATCAGAGAGAGTTTATTCATCTTATCTTGAATTGAACCTTGAAGAAGTCGAACCATGCATCTCGGGACCCAAGAGACCTCATGATCGGGTGCCTTTGAAAAATATGAAGGCTGATTGGCATTCTTGTCTTGACAACAAAGTGGGATTTAAGGGATTTGCTATACCAAAAGATGCACAAGGTAAAGTTGCAAAATTTAATTTCCATGGGCAGCCAGCAGAGCTCAAGCATGGCAGTGTTGTGATTGCTGCAATCACAAGCTGTACGAATACATCAAACCCAAGTGTTATGCTTGGGGCTGGTCTTGTAGCAAAGAAGGCTCTTGAGCTAGGTTTGAAGGTTAAGCCATGGGTAAAAACAAGTCTTGCTCCTGGATCTGGAGTTGTTACAAAATATCTACTTAAGAGTGGCTTGCAAAAATATCTAAATGAACAAGGTTTCAATATTGTTGGATTTGGCTGTACCACATGTATTGGAAATTCAGGGGATTTGGACCAATCAGTCGCTTCTGCTATCTCTGAAAATGACATTGTAGCTTCTGCTGTGTTATCTGGTAACCGTAATTTTGAAGGTCGTGTGCATCCCCTGACAAGAGCTAACTACCTTGCTTCACCACCTCTAGTTGTTGCTTATGCTCTTGCTGGCACAGTTGACATTGACTTTGAAAAGGAGCCAATAGGGACAGGGAAAGATGGAAAGAATATTTACTTAAGGGAAATTTGGCCATCAACTCAAGAAATTGCGGAGGCAGTTCAATCCAGTGTGTTGCCTGACATGTTCCGAAGTACATATGAAGCTATTACCAAAGGGAATGCGATGTGGAACCAACTACAAGTTCCTGCTGAGACCCTATACTCGTGGGACCCCAAGTCAACATACATTCATGAACCTCCATACTTCAAGGGCATGACCATGGATCCCCCTGGAGCTCATGGTGTGAAAGATGCCTACTGTCTGCTGAATTTTGGTGACAGTATAACAACTGATCACATTTCTCCTGCTGGAAACATTAACAAGGACAGTCCTGCTGCAAAATACCTTCTTGAGCGACAGGTTGAACAAAAGGACTTCAACTCTTATGGAAGTCGTCGTGGGAATGATGAAGTGATGGCAAGAGGAACTTTTGCCAACATTCGTCTCGTTAACAAGCTCTTGAATGGGGAAGTTGGCCCCAAGACAGTTCACATTCCGACTGGGGAGAAACTTTATGTGTTTGATGCAGCACAGAGATACAAGGCTGCAGGGCAGGACACCATTGTGTTGGCTGGAGCTGAATATGGTAGTGGAAGTTCCAGAGATTGGGCCGCCAAGGGTCCCATGTTATTGGGTGTCAAAGCTGTGATAGCTAAAAGTTTTGAGAGAATTCATCGTAGTAATTTGGTAGGAATGGGTATTATTCCTCTTTGCTTTAAATCTGGCGAGGACGCTGACAAATTGGGATTGACCGGTCACGAGCGATATACTATTGACCTCCCAAGTAATATCAGCGAGATAAGGCCCGGCCAAGATGTCACTGTAACAACAAATACTGGAAAATCTTTCACATGCACAGTTCGCTTCGACACCGAGGTGGAACTTGCTTACTTTAACCATGGGGGCATACTTCCGTATGTCATCAGGAACCTCATTAAGCAGTGA 3009 0.4546 MATTAFSLLRASRSKLASSSSSASLSRTFTRSATHRSLGSSAARSFASAVPRWSHGVDWRSPLGLRPQIRAVSPLIERFHRRIATSVSLMFGAEFCVLSDVSAIAAAENPFKGNLTSLPKPGGGEFGKFYSLPSLNDPRIDRLPYSIRILLESAIRNCDNFQVTKGDVEKIVDWESSSVKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVVDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSNAFRNMLVVPPGSGIVHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRNGVTATDLVLTVTQMLRKHGVVGKFVEFYGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIEAYLRANKLFVDYNEPQSERVYSSYLELNLEEVEPCISGPKRPHDRVPLKNMKADWHSCLDNKVGFKGFAIPKDAQGKVAKFNFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKALELGLKVKPWVKTSLAPGSGVVTKYLLKSGLQKYLNEQGFNIVGFGCTTCIGNSGDLDQSVASAISENDIVASAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGKDGKNIYLREIWPSTQEIAEAVQSSVLPDMFRSTYEAITKGNAMWNQLQVPAETLYSWDPKSTYIHEPPYFKGMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGNINKDSPAAKYLLERQVEQKDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHIPTGEKLYVFDAAQRYKAAGQDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADKLGLTGHERYTIDLPSNISEIRPGQDVTVTTNTGKSFTCTVRFDTEVELAYFNHGGILPYVIRNLIKQ 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02905 1002 FunFam Aconitate hydratase 109 476 - -
Pste3g02905 1002 SUPERFAMILY Aconitase iron-sulfur domain 123 737 IPR036008 -
Pste3g02905 1002 Gene3D Aconitase, domain 3 477 700 IPR015931 -
Pste3g02905 1002 NCBIfam aconitate hydratase AcnA 127 1000 IPR006249 -
Pste3g02905 1002 CDD AcnA_IRP_Swivel 778 948 IPR044137 -
Pste3g02905 1002 Pfam Aconitase family (aconitate hydratase) 169 672 IPR001030 -
Pste3g02905 1002 FunFam cytoplasmic aconitate hydratase 477 700 - -
Pste3g02905 1002 PRINTS Aconitase family signature 251 264 IPR001030 -
Pste3g02905 1002 PRINTS Aconitase family signature 380 393 IPR001030 -
Pste3g02905 1002 PRINTS Aconitase family signature 476 490 IPR001030 -
Pste3g02905 1002 PRINTS Aconitase family signature 304 317 IPR001030 -
Pste3g02905 1002 PRINTS Aconitase family signature 394 407 IPR001030 -
Pste3g02905 1002 PRINTS Aconitase family signature 275 283 IPR001030 -
Pste3g02905 1002 PRINTS Aconitase family signature 603 616 IPR001030 -
Pste3g02905 1002 PRINTS Aconitase family signature 318 333 IPR001030 -
Pste3g02905 1002 PRINTS Aconitase family signature 541 552 IPR001030 -
Pste3g02905 1002 Gene3D Aconitase, domain 4 765 1001 IPR015928 -
Pste3g02905 1002 Gene3D Aconitase, domain 3 108 476 IPR015931 -
Pste3g02905 1002 PANTHER ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER 104 999 IPR006249 -
Pste3g02905 1002 ProSitePatterns Aconitase family signature 1. 537 553 IPR018136 -
Pste3g02905 1002 Gene3D - 701 762 - -
Pste3g02905 1002 FunFam Aconitate hydratase 764 1001 - -
Pste3g02905 1002 SUPERFAMILY LeuD/IlvD-like 741 1000 - -
Pste3g02905 1002 CDD AcnA_IRP 190 674 - -
Pste3g02905 1002 ProSitePatterns Aconitase family signature 2. 603 616 IPR018136 -
Pste3g02905 1002 Pfam Aconitase C-terminal domain 801 928 IPR000573 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02905 Pste-Chr3 21851599 21858794 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02905 3 21851599 21858794 Pste3g02905 3 21851599 21858794 ECH
Pste3g02905 3 21851599 21858794 Pste1g03094 1 13876590 13893201 PCT