Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03094 AAAAAAGCCGGCACTTTCTAAACTAGTTGCTCAGTGGAGCTATTTTATGGTGTGACAGTAGCTGAGTCCGTGAGCTCAGCCTCAATGGTGCGACTTTAACGTCAAAATCAGTAGTCACATATCAACAACACCTTCAACAAGGCACGCAGCCCTAGTTCAAATTGACAAGCACACGCCCCCCCATACCCTTCCTATTTCATCTCTCTGGTTGCAGCACAAGAGGCCAAAACCGTTACCATTTCCGTCACGCACTTTCCCCACGCATCCTTATCCAGCCTTCGAATGCGTGATCACCGCCATGTATATAACGGCCTCTTCCTCTGGCTTTTCGCTCCTCAGAGCAACCAGCCCTAAACTCTTCTCTCCCTCTAGAACCTTCGCTTCCCGCACTTCCTCCTCCACCACCCTTCGTTCCTTCCGCCCCTCCCTTCGGCGCTGGAGCCACCGTCTCCATTGTGCCTCTCCGCTCACGCTTCCTCCTCTTATCAGAGCCGTCGCTCCCCTCGTCCAACGCTTCCACCGCCAAATCGCTACCATGGCCAATGAAAATCCTTTCCATGGAAACTTGACTAGTCTCCCCAAGCCCAGTGGTGGCGAATTTGGAAAGTTCTACAGCCTTCCTTCTCTCAATGATCCAAGAATTGACAGGTTACCATACTCCATCAGAATTCTTCTTGAATCTGCCATTCGTAATTGTGACAATTTTCAAGTAAAAAAAGAAGATGTTGAGAAGATTCTCGACTGGGAAAACAATTCTACGAAGCAAGTTGAGATTCCTTTCAAGCCTGCACGTGTTCTCTTGCAGGATTTTACTGGAGTTCCAGCTGTTGTTGACCTGGCTTGCATGCGTGATGCCATGAATAAGCTTGGGAGTGATTCCAATAAGATCAATCCACTGGTTCCTGTTGATCTTGTCATTGATCATTCAGTTCAAGTTGATGTTACAAGGTCAGAAAATGCAGTGCAGGCTAATATGGAGCTTGAATTCCAAAGAAACAAGGAGAGATTTGCTTTTCTTAAATGGGGGTCAACTGCCTTCCGTAACATGCTTGTTGTTCCTCCTGGTTCTGGTATAGTACATCAGGTCAATCTTGAATATCTTGGAAGGGTTGTATTCAACAATGAAGGCCTACTCTATCCTGACAGTGTGGTTGGGACTGATTCACATACAACTATGATAGATGGGCTTGGTGTTGCTGGATGGGGAGTTGGTGGTATTGAAGCTGAGGCTGCAATGCTTGGTCAGCCTATGAGCATGGTTTTACCTGGTGTTGTTGGGTTCAAGTTATCTGGAAAACTACGCAATGGTGTTACAGCAACTGACTTAGTTCTAACTGTGACTCAAATTCTCAGAAAGCATGGTGTTGTGGGCAAATTTGTTGAATTTTATGGTGATGGTATGGCTGAATTATCTTTGGCTGACAGGGCCACTATTGCCAATATGTCTCCTGAATATGGTGCTACCATGGGCTTCTTCCCTGTGGATCATGTTACATTACAATATCTCAAGTTAACTGGAAGAAGTGATGAGACTGTGGACATGATAGAGTCTTATCTCAGGGCAAACAAACTGTTTGTTGACTATAATGAGCTGCAACAAGACAGAGTTTATTCATCATATCTTGAATTAAACCTTTCCGATGTTGAACCATGTATTTCAGGACCGAAGAGACCTCATGATCGGGTGCCTTTGAAAGAAATGAAGGCTGACTGGCATGATTGTCTTGATAACAAAGTTGGGTTTAAGGGATTTGCTATACCAAAAGAGGCACAAGGAAAAGTTGCAAAATTTGATTTCCGTGGGCAGCCAGCGGAGCTTAAGCATGGCAGTGTTGTGATTGCTGCAATCACAAGTTGTACAAATACATCAAATCCAAGTGTTATGCTTGGTGCTGGTCTTGTTGCAAAAAAGGCTCATGAGCTTGGTTTGCAGGTGAAGCCTTGGGTTAAAACAAGTCTTGCTCCAGGCTCTGGAGTTGTTACGAAATATCTACTCCAGAGTGGACTACAAAAATATCTAAATGAACAAGGTTTTCATATCGTTGGATTTGGTTGCACAACATGTATTGGCAATTCAGGAGAGCTGGATGAGTCTGTTGCTTCTGCCATCTCAGAAAATGACATTGTAGCAGCTGCTGTGTTGTCTGGGAACCGTAATTTTGAGGGGCGAGTACATCCATTGACAAGAGCCAACTACCTTGCCTCTCCTCCTCTAGTTGTTGCTTATGCTCTTGCTGGCACGGTTGATATTGACTTTGAGAAGGAGCCAATTGGGACAGGGAAGGGTGGAAAGAATGTCTATTTGAGGGATATCTGGCCATCTACAGAAGAAATTGCCAAGGTTGTCCAATCCAGTGTGTTGCCTGACATGTTCCGAAGTACATATGAGGCTATTACCAAAGGAAACGCCATGTGGAATCAACTACAAGTTCCTGCTGACACTCTCTACTCATGGGACCCCAACTCAACATATATTCATGAACCCCCGTACTTCAAGAATATGACCATGGATCCTCCAGGACCTCATGGTGTAAAAGATGCTTATTGCCTGCTGAATTTTGGTGACAGTATAACCACTGATCATATTTCTCCGGCTGGAAGCATTAACAAGGATAGTCCTGCTGCTAAATACCTTCTTGAGCGGGGGGTGGAACGCAAGGACTTCAATTCTTATGGAAGTCGCCGTGGCAATGATGAGGTGATGGCAAGGGGAACTTTTGCCAACATACGCCTTGTAAACAAGCTCTTGAATGGGGAAGTTGGCCCAAAGACAATTCACATTCCAACAGGGGAAAAGCTTTACGTGTTTGAAGCAGCGACGAGATACAAGGCTTCTGGGCAAGACACTATTGTGCTGGCTGGAGCTGAATATGGTAGTGGAAGTTCTAGAGATTGGGCTGCTAAGGGTCCTATGCTATTGGGAGTGAAAGCTGTGATAGCCAAGAGTTTCGAGAGAATTCATCGCAGTAACTTGGTAGGAATGGGTATTATTCCTCTTTGCTTCAAACCCGGTGAGGATGCGGACACATTGGGATTGACTGGTCATGAACGTTATACAATTGACCTCCCTAGTAAAATAAGTGAGATTAGACCTGGCCAAGACGTGACAGTCACAATCGATAATGGTAAATCTTTCACCTGCACAGTACGCTTCGATACTGAGTATTCCTGCAATCTCACCATGTCGCGGCTCCTCCGATCTACCAAGGCCAAGCTCTTCTCTTCCTCTTCTTCACTTTCTGGAACCTTCTCTCGCCCCTCCCATGACCTCCCTCACAATCACATCGGATCCCTCTCTCCCCTTCACGATCTCTTCCACCGCACCACCACCACCATGCCTCAAGCGAAGGAAAATGCTTCCAGTGGAAAACTGACCGGTGCCGATTCTAATGCGGTCAATTCTTCGAGGTACAAAGCTTCTGGACTGGACTCCAATGTGCTGGCTGGAGCTAGACATGTCCCTAGAGTTTGGGCTGCACAGGGTCCAATGCTATTGGGAGTCAATTCTGTAGTGGCTAGAAGTTTTGAGAGAGGCATGGAAGCTGGCACATTGGGAATGATTGGTCACAAGCGTTTTATTAGTAACACCCCAAGTAAAACCAGTCAAACAAACCCTTCTGGTTTTCGTCCATTGTCTCCTCATCTTCCTCTTTATGAGCCCCAACTTTCCTCGACCCTCTCAATTTTCAATAGAATTGCGGGAGCTTCTCTAGCAGCTGTCATTTTGGCTTTTTATATGATATATATGAAAGTGGGTTTGGTTAGCTTCACCTATGACTCTTTCTACCAATTCATGTTTTATTCGTCAAAACTCAACCTACTTGTCATGGAGCTTTCTGCCGTAGCCGTGACCTATCATCTGTATAGTGCAATTCGTCATCTGTTCTTATGATTTGAGTCAACAACTGACACTTGAACTGTACGTTTGAACCCGAGGTGGAATTGTGCTTAATTCGACCTTGGAGGCATAACTTCCGTATGTCAGTCATAAGGAAACTTCATTAAGAAATGTGAATTTGCTTTTCTTTAGTTGTCTATTATCGATTTAATAATTCACAATTCTGGCACAACTTCGTGAGCATAACTGCATCTATTTTTCACCTGACATTCGGTCATGGATTTTTGCAGCCCTCTCAAATAAATAACTTTCATTTAATAAATGCATTTGAGTTTTGGTGACTCTTAAGATACATTATCACTTGTACGATTCAATGCATTGTTCATTGTTTATTGAAGAAATATGAATGAAATTTAAAGTAAACTAGGGGTAG 4271 0.4442 MYITASSSGFSLLRATSPKLFSPSRTFASRTSSSTTLRSFRPSLRRWSHRLHCASPLTLPPLIRAVAPLVQRFHRQIATMANENPFHGNLTSLPKPSGGEFGKFYSLPSLNDPRIDRLPYSIRILLESAIRNCDNFQVKKEDVEKILDWENNSTKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVQANMELEFQRNKERFAFLKWGSTAFRNMLVVPPGSGIVHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRNGVTATDLVLTVTQILRKHGVVGKFVEFYGDGMAELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVDMIESYLRANKLFVDYNELQQDRVYSSYLELNLSDVEPCISGPKRPHDRVPLKEMKADWHDCLDNKVGFKGFAIPKEAQGKVAKFDFRGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKAHELGLQVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFHIVGFGCTTCIGNSGELDESVASAISENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGKGGKNVYLRDIWPSTEEIAKVVQSSVLPDMFRSTYEAITKGNAMWNQLQVPADTLYSWDPNSTYIHEPPYFKNMTMDPPGPHGVKDAYCLLNFGDSITTDHISPAGSINKDSPAAKYLLERGVERKDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLYVFEAATRYKASGQDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDADTLGLTGHERYTIDLPSKISEIRPGQDVTVTIDNGKSFTCTVRFDTEYSCNLTMSRLLRSTKAKLFSSSSSLSGTFSRPSHDLPHNHIGSLSPLHDLFHRTTTTMPQAKENASSGKLTGADSNAVNSSRYKASGLDSNVLAGARHVPRVWAAQGPMLLGVNSVVARSFERGMEAGTLGMIGHKRFISNTPSKTSQTNPSGFRPLSPHLPLYEPQLSSTLSIFNRIAGASLAAVILAFYMIYMKVGLVSFTYDSFYQFMFYSSKLNLLVMELSAVAVTYHLYSAIRHLFL 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03094 1197 CDD AcnA_IRP 165 649 - -
Pste1g03094 1197 ProSitePatterns Aconitase family signature 2. 578 591 IPR018136 -
Pste1g03094 1197 SUPERFAMILY LeuD/IlvD-like 716 962 - -
Pste1g03094 1197 CDD AcnA_IRP_Swivel 753 923 IPR044137 -
Pste1g03094 1197 FunFam Succinate dehydrogenase subunit 3-1, mitochondrial 1095 1196 - -
Pste1g03094 1197 SUPERFAMILY Aconitase iron-sulfur domain 97 712 IPR036008 -
Pste1g03094 1197 FunFam Aconitate hydratase 84 451 - -
Pste1g03094 1197 Gene3D Aconitase, domain 3 452 675 IPR015931 -
Pste1g03094 1197 PRINTS Aconitase family signature 355 368 IPR001030 -
Pste1g03094 1197 PRINTS Aconitase family signature 451 465 IPR001030 -
Pste1g03094 1197 PRINTS Aconitase family signature 293 308 IPR001030 -
Pste1g03094 1197 PRINTS Aconitase family signature 279 292 IPR001030 -
Pste1g03094 1197 PRINTS Aconitase family signature 369 382 IPR001030 -
Pste1g03094 1197 PRINTS Aconitase family signature 516 527 IPR001030 -
Pste1g03094 1197 PRINTS Aconitase family signature 578 591 IPR001030 -
Pste1g03094 1197 PRINTS Aconitase family signature 226 239 IPR001030 -
Pste1g03094 1197 PRINTS Aconitase family signature 250 258 IPR001030 -
Pste1g03094 1197 ProSitePatterns Aconitase family signature 1. 512 528 IPR018136 -
Pste1g03094 1197 FunFam Aconitate hydratase 740 964 - -
Pste1g03094 1197 Gene3D - 676 737 - -
Pste1g03094 1197 PANTHER ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER 1035 1080 IPR006249 -
Pste1g03094 1197 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 1094 1197 IPR034804 GO:0016020
Pste1g03094 1197 Gene3D Aconitase, domain 4 740 964 IPR015928 -
Pste1g03094 1197 NCBIfam aconitate hydratase AcnA 102 956 IPR006249 -
Pste1g03094 1197 Gene3D Aconitase, domain 3 83 451 IPR015931 -
Pste1g03094 1197 CDD SQR_TypeC_SdhC 1110 1197 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Pste1g03094 1197 Pfam Succinate dehydrogenase/Fumarate reductase transmembrane subunit 1110 1197 IPR000701 GO:0016627
Pste1g03094 1197 Pfam Aconitase C-terminal domain 776 903 IPR000573 -
Pste1g03094 1197 FunFam cytoplasmic aconitate hydratase 452 675 - -
Pste1g03094 1197 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 1104 1196 IPR034804 GO:0016020
Pste1g03094 1197 Pfam Aconitase family (aconitate hydratase) 144 647 IPR001030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03094 Pste-Chr1 13876590 13893201 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02905 3 21851599 21858794 Pste1g03094 1 13876590 13893201 PCT