Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02850 CGTTACGTGGAATGAATGTTATGGGGCTATAAATAATCCCTAACCACGGCAGGACTCTCTTGTGAGCCATCAGAGACAAAGCATTTGGGAGGAGAAGCTTCACTTGGTTCTGTTTGTTCACTTCTGAGTTGCATACAATTTTGTCCCTTTTTCTGTTCTTCTTTGTGCAATTTAAGTAACTCTTGTTTCCAATGTCCAAGATGTTGGGAGTGTTTGTGGGTCTTTTGTTGGTGGGGTTGGCTGCCTCTGCCAAGTTTGATGAACTCTTCCAGCCCAGTTGGGCCATGGACCATTTCATCCATGAAGGACAACTCCTCAAACTCAAACTTGATAACTATTCTGGTGCTGGGTTTGTATCTAAGAACAAATATATGTTTGGGAAAGTGACCATCCAGCTCAAGCTTGTGGAAGGTGACTCAGCTGGAACCGTTACTGCTTTTTATGCTTTGGCGTCATTGTGTTCCATCGGATTCGAAGTAGATAACACGCCAATAAGGGTGCACACAAATCTGGAGCACAAGGGCATTCCCTTCCCAAAGGACCAAGCCATGGGCGTGTACAGCTCCATCTGGAATGCAGATGATTGGGCGACGCAGGGTGGTCGTGTGAAGACAGATTGGAGTCACGCACCGTTCATTACCACCTACAAGGACTTCCGAATCGATGCATGCGAGTGCCCTGTGCCCATGACATCAGCGGATAACGCTAAAAAATGTAGCAGCAGTGAGGACAACAAGTATTGGTGGGACGAACCAACATTGTCCCAACTGAACTTGCACCAGAGCCACCAGCTTATGTGGGTTAGGGCTAACCATATGGTCTATGATTATTGCACCGACACTGCTAGGTTCCCCGTCATACCTGCTGAGTGTGTACATCACCGCCACCATTGAAAACATGTCCTTCATGTTTTGCATTGTAACATATTTATTTTGCCTCGTTTTCTAGCTAGTGCCATCTAATTTAATTCCTTTTTATATATGTCCTTTTTGTTCCTTTATTTTTATTTTTTTTATTTCTACCAAGTTGGCAAGTG 1036 0.4459 MSKMLGVFVGLLLVGLAASAKFDELFQPSWAMDHFIHEGQLLKLKLDNYSGAGFVSKNKYMFGKVTIQLKLVEGDSAGTVTAFYALASLCSIGFEVDNTPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFITTYKDFRIDACECPVPMTSADNAKKCSSSEDNKYWWDEPTLSQLNLHQSHQLMWVRANHMVYDYCTDTARFPVIPAECVHHRHH 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02850 233 Pfam Glycosyl hydrolases family 16 91 144 IPR000757 GO:0004553|GO:0005975
Pste3g02850 233 Pfam Glycosyl hydrolases family 16 25 85 IPR000757 GO:0004553|GO:0005975
Pste3g02850 233 Gene3D - 12 89 - -
Pste3g02850 233 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 180 227 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Pste3g02850 233 PIRSF EndGlu_transf 1 90 IPR016455 GO:0010411|GO:0016762|GO:0042546
Pste3g02850 233 PIRSF EndGlu_transf 85 232 IPR016455 GO:0010411|GO:0016762|GO:0042546
Pste3g02850 233 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 19 85 IPR044791 GO:0004553
Pste3g02850 233 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 231 IPR013320 -
Pste3g02850 233 Gene3D - 90 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02850 Pste-Chr3 21226719 21229049 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02850 52 232 Glycoside Hydrolase AT4G03210 51.055 8.63e-77 231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03159 1 14275733 14278191 Pste3g02850 3 21226719 21229049 PCT