Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03159 TCACCACTCACCACTCACTACTCGGCATTTCAGAGTAGAACCTTCACTCTGCTCTTCCCATATTCCTGGGTTTCCCTCTGCTATCAGTCATGTCCGGGTCCTTGGGATTGTTTGTGGGTCTTTTGTTTCTGCTGGGGGTGGCTAATGCTGTGTCTAATTCTTCCAACTTTGATCAACTTTTCCAACCAAGTTGGGCTTTTGATCACTTCATTCATGAAGGGGATCTCCTCAAACTCAAACTCGACAATTATTCTGGAGCTGGTTTTGCATCCAAAAGCAAGTATATGTATGGGAAAGTCTCCATCCAGCTTAAGCTGGTGGAAGGTGATTCTGCTGGTACTGTCACTGCCTTCTATACTTGGCTTCACTGTGTAGCCATTGGGGGGTCACACAAAAACAAAACTATGGAAAAGGAAATGGAATCTTGGACAATTCATGGGTTTTCGGTGGATGGCACGCCAATAAGGGCGCACGCAAACATGGAGCACAAGGGAATTCCTTTTCCTAAAGACCAACCCATGGGTGTATACAGTTCTATATGGAATGCTGATGATTGGGCAACGCAGGGTGGTCGTGTGAAAACTGATTGGAGCCACGCACCCTTCTTTGCCACCTACAAGAACTTTGAAATCAATGCGTGTGAGTGTCCTGTGTCAGTGGCTGCAATGGATAATGCTAAGAAATGCACCAGCAGTGAGGCTAAGAAGTATTGGTGGGATGAGCCTAATTTGGCGGAACTCAACTTGCACCAGAGCCACCAGCTCATGTGGGTTAAGGCCAGGCACATTTTCTATGACTATTGCACTGACACTGCTAGGTTCCCAGTCATGCCTGCTGAGTGTGTCCATCACCGTCACAACTGAGATACATAACTAGTCTTCTATTTTATTGTTATTAAGGGAAAGTAATGAAAATAGGATTGGGGGATCAGAGAAAATGGTGGGTGGTTTAAAAAGTTGTGGAACATGTTCTTCATGTTTCTGATTGTAATATATTGCCACGGCATAATGTGAATTATTAGTTTTTCTTCTTGTACAATCAAATGAGATCCTGGATGGAATGGAGTATCAAATGAGATATGGTGCCAATCTATAAGTATAATAATGGATAATAAGTTTGAATTGGTAGCTAATCTT 1136 0.4331 MSGSLGLFVGLLFLLGVANAVSNSSNFDQLFQPSWAFDHFIHEGDLLKLKLDNYSGAGFASKSKYMYGKVSIQLKLVEGDSAGTVTAFYTWLHCVAIGGSHKNKTMEKEMESWTIHGFSVDGTPIRAHANMEHKGIPFPKDQPMGVYSSIWNADDWATQGGRVKTDWSHAPFFATYKNFEINACECPVSVAAMDNAKKCTSSEAKKYWWDEPNLAELNLHQSHQLMWVKARHIFYDYCTDTARFPVMPAECVHHRHN 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03159 257 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 24 90 IPR044791 GO:0004553
Pste1g03159 257 Gene3D - 112 257 - -
Pste1g03159 257 PIRSF EndGlu_transf 112 256 IPR016455 GO:0010411|GO:0016762|GO:0042546
Pste1g03159 257 PIRSF EndGlu_transf 3 97 IPR016455 GO:0010411|GO:0016762|GO:0042546
Pste1g03159 257 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 204 251 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Pste1g03159 257 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 255 IPR013320 -
Pste1g03159 257 Gene3D - 16 111 - -
Pste1g03159 257 Pfam Glycosyl hydrolases family 16 30 90 IPR000757 GO:0004553|GO:0005975
Pste1g03159 257 Pfam Glycosyl hydrolases family 16 118 168 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03159 Pste-Chr1 14275733 14278191 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03159 57 256 Glycoside Hydrolase AT4G03210 51.477 3.21e-80 240
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03159 1 14275733 14278191 Pste3g02850 3 21226719 21229049 PCT