Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02843 ATGTTTGGTGCCACAGTCCGCAATTCAACAGCTACTAATTCTCTAGCCATGCCTGAAGCTCCAAAGCACTTATGCTACGAGCCAAAGGATGATGTGAGTAACATCGAGGACAATAATAAGAAAGCACTGGAATTCATTGAAGAGGTTACCAGCAACGCTGATGAAATTCAAGAAAAGGTGCTTGCTCAGATCCTTTCTCGTAGTGCTCATGCTGAGTACCTCCAACGCCACGGCCTTGATGGGCGCACTGACAGAAACACTTTCAAAGCACTCATGCCTGTCATCACTTACGAGGATTTAAAGCCAGATATTGATCGTATAGCTAATGGTGATACCTCACCAATTTTATGTTCCAAACCCATATCAGAGTTCCTCACTAGCTCGGGAACTTCGGGTGGGGAGAGAAAATTGATGCCAAGCATAGAAGAGGAGCTAGAGAGGAGGTCATTGCTTTATAGCCTATTGATGCCAGTGATGAATCAATTTGTGGCCGGTTTGGAGAAAGGAAAAGGCATGTACTTTTTGTTCACAAAATCAGAGGCCAAGACCCCAGGTGGACTCCTTGCTCGTCCAGTTTTGACCAGCTATTACAAAAGCTCGCATTTCAAGCACCGCAATAAACACGATCCTTACGCAAACTACACCAGTCCAGATGAAACCATTCTCTGCCCTGACTCTTACCAAAGCATGTACTCTCAACTGCTTTGTGGCCTTTGCCTAAACGAGCAAGTTCTTCGTGTTGGGGCCGTCTTCGCCTCAGGTTTCCTTCGTGCTCTTAAGTTCCTCGAAAACCACTTTGTTTGTTTGTGCAACGACATAAGAAGGGGTACCTTAGACACAAAAATCACTGACCCTTTTGTGAGAGACGCCGTCATGAAAATACTCAAACCAAATCCCATGCTTGCGGATTTCGTAGAAGCCGAATGCATGAAGGGGTCATGGAAGGGAATTATTACTAGGATATGGCCAAGCACCAAGTATGTCGATGTTATTGTCACGGGAACCATGTCTCAGTACATTCCTATATTGGATTATTATAGTAATGGTCTCCCTCTAGTGTGCACCATGTATGCCTCTTCAGAGTGCTATTTCGGCCTCAATTTGAACCCCTTGTGTGACCCAACTGAGGTTGCTTACACCCTCATTCCAACCATGGCCTACTTCGAGTTCTTGCCCGTTGACCACATCCACGGACATACTAATTCAATTTCTCACCTCGACCAACAACATTTGGTAGATCTTGCCAATGTCAAGCTGGGTCAAGAGTACGAGCTTGTGGTCACCACTTATGCAGGACTTTATAGATATCGTGTTGGTGACATACTCCGTGTAGCTGGATTAAAAAATAAGGCACCTGGATTCAAGTTCGTGTGCAGAAAGAACGTGGTTCTGAGCATTGATTCAGACAAAACGGACGAAGTTGAGTTACAGAATGCTGTGAAGAGTGGAGCTAACAATCTTGCACAATTGAGGGCATCTCTAACAGAATACACAAGTTGTGTGGATACATCAACAATCCCTGGCCACTACGTTGTGTATTGGGAAATTAGCAGAGATAGGCAAAGCCCAACGATTCCCTGCTCTGTTTTGGAGGATAGTTGCCTTGCAATTGAGGAGTCTCTAAACAGCGTGTATCGACAGGGCAGGGTATCAGAGTGTATTGGACCTTTGGAAATCAAGGTGGTTGAGAATGGAACATTCGACAAACTCATGGACTTTGCTCTCAGCCAGGGTGCGTCCATTAACCAATACAAGACACCTCGTTGCGTCACATATGCCCCCATTCTCCACCTTCTAAACTCCAAAGTTGTTTCCAATTACTTCAGCCCAAAATGCCCCAATTGGGTTCCTCCTCACAACCCTCTTCCTTGA 1872 0.4535 MFGATVRNSTATNSLAMPEAPKHLCYEPKDDVSNIEDNNKKALEFIEEVTSNADEIQEKVLAQILSRSAHAEYLQRHGLDGRTDRNTFKALMPVITYEDLKPDIDRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPSIEEELERRSLLYSLLMPVMNQFVAGLEKGKGMYFLFTKSEAKTPGGLLARPVLTSYYKSSHFKHRNKHDPYANYTSPDETILCPDSYQSMYSQLLCGLCLNEQVLRVGAVFASGFLRALKFLENHFVCLCNDIRRGTLDTKITDPFVRDAVMKILKPNPMLADFVEAECMKGSWKGIITRIWPSTKYVDVIVTGTMSQYIPILDYYSNGLPLVCTMYASSECYFGLNLNPLCDPTEVAYTLIPTMAYFEFLPVDHIHGHTNSISHLDQQHLVDLANVKLGQEYELVVTTYAGLYRYRVGDILRVAGLKNKAPGFKFVCRKNVVLSIDSDKTDEVELQNAVKSGANNLAQLRASLTEYTSCVDTSTIPGHYVVYWEISRDRQSPTIPCSVLEDSCLAIEESLNSVYRQGRVSECIGPLEIKVVENGTFDKLMDFALSQGASINQYKTPRCVTYAPILHLLNSKVVSNYFSPKCPNWVPPHNPLP 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02843 623 Pfam GH3 auxin-responsive promoter 46 591 IPR004993 -
Pste3g02843 623 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 39 612 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02843 Pste-Chr3 21183999 21187124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02843 33 609 EF-hand Containing Proteins AT1G23160 48.805 0.0 552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02843 3 21183999 21187124 Pste3g02843 3 21183999 21187124 ECH
Pste3g02843 3 21183999 21187124 Pste1g03198 1 14533403 14538023 PCT