Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03198 CTTAGTAAATAATGGTTAGTTTAATTTGATGATTGATTAAATTGGGCTACACGAAGCACGAACCTTCTTGGATATATCATTTTTAAGTATACTGTTTCCACCGGACTCTCAAGTGGTTTTCAAGTTCTAACCAACCTTCACTTGCTCCCTATATATATGTCCTTTCACTTTGATTTGTTTTCCAAATCTCTCCCCCTTCTTAAGTCTTAAGTCCAAACCCCAAAGTTTACATTCTTCATATTTCCCGTTTCCATTCCCATCAACGCCTTTTTAGTATATACTTCTTGTTACACTTTCACTAGCTACGTATATATATTATCTAAAGCCAAGCCATGCCTGAGGCTCCTAGCCACAACCTTTGCAATAAGCCAAATGGAAAAATTGATGATGATGGTACTAGTAATACTACTAGCATCATCCAGCACAACAATAAGAAAGCACTGAATTACATTGAGGATGTTACTAGCAACGCTGATGAAATTCAGAAAAGGGTCCTAGCTGAGATCCTTTCTTCTAATGCAAACGTTGAGTACCTTCAACGCCATGGCTTAAAGGGGCGCACAGACAGAGACACCTTCAAGGAGCTCATGCCTGTGGTCACATACGAAGATTTAAAACCAGACATTGATCGTATAGCTAATGGTGATGCCTCCTCAATTTTATGTTCCAAACCAATTTCTGAGTTCCTCACTAGTTCTGGAACATCCGGTGGGGAGAGAAAATTGATGCCAACCATAGAAGATGAGCTAGAACGGAGGTCACTACTCTACAGCCTCTTGATGCCAGTGATGGACCAATTTGTTCCCGGTTTAGACAAAGGCAAGGGTATGTACTTTTTGTTCATAAAATCAGAAGCCAAAACCCCAGGGGGGCTCCTAGCTCGTCCAGTTTTAACAAGTTACTACAAGAGCTCACACTTCAAGAACAGCACAGATAGATATGATCCCTACACAAACTACACTAGCCCCATTGAAACCATTCTCTGCCTAGACTCTTACCAAAGCATGTACTCTCAGATGCTTTGTGGACTTTTTCAAAATCAACAAGTTCTTCGTGTTGGGGCTGTTTTTGCCTCAGGTTTCATCCGTGCCATTAAGTTCTTAGAAAAACACTGGATTTCTTTGTGCCGTGACATAAGAAACGGTACCATAGACCCTGAGATCAGTGACTCGTCTGTTAGAGAGGCCATCATGAAGATACTCAAACCAAACCCCAAGCTCGCGGATTTCATAGAAGGTGAGTGCAAGATGGAGTCCTGGAAGGGGATCATTACTAGGTTGTGGCCTAACACCAAGTATGTTGATGTTATTGTTACTGGCACCATGTCTCAGTATATTCCTATATTGGGTTACTATAGCAATGGTCTCCCTCTTGTTTGCACCATGTATGCTTCTTCTGAGTGTTACTTTGGCCTCAACTTGAACCCTTTGTGTGAACCGAGTGAGGTGTCTTACACCCTCATTCCCACCATGGCCTACTTTGAGTTCTTGCCCCTTAATAAGATGAAGGGACATGCCAATTCAAATTCTCAACCTGAGCAGGTACATTTGGTTGATCTTGTGGATGTGGAGCTGGGTCAAGAATATGAGCTAGTGGTCACCACCTATGCAGGACTTTATAGGTACCGGGTTGGTGACATACTCCGAGTGGCAGGATTCAAAAACAATGCTCCTCAATTCAACTTTGTGTGCAGAAAGAATGTGGTTTTGAGCATTGATTCTGACAAGACTGACGAGGTTGAGCTACAAAATGCTGTGAAGAATGGAGCTAAGCATCTTGCACAATTTGGTTCATCACTCACAGAATACACAAGCTGTGCTGACACATCCACCATCCCAGGCCACTATGTACTATACTGGGAGATTAGCACCATTGATCAAACTCCAATTCCTGGTTCTGTTTTTGAGGAGTGTTGCTTTGCAGTTGAAGGGTCTCTCAACAGTGTGTATAGACAAGGCAGAGTGTTAGAGTCTCTTGGACCTTTGGAAATCAAGATTGTGGAGAATGGAACATTTGACAAGCTTATGGACTTTGCTGTTAGCCAGGGTGCGTCCATAAATCAGTACAAGACTCCTCGTTGTGTGAAATATTCTCCCATTGTTGAGCTTCTTGACTCCAAGACAGTTTCCAATTACTTCAGTCCAAAATGTCCACAGTGGGTTCCTGGTCATAAGAAGTGGTGCTTGTACCCTTGACTTTAAATAATAGTAGAACCGCTAGCTCGCATAGGTCGTGGAGTAATTGTTTTTATCTATAATTTTGTTTTATTAACTCGTAGAAAAGCCATCATGGTTCATTGATGTTGTAGTCTCTGAGGTTTAAGTTTATCCAATCTAGTGTCAGATCTTTTCTGTAAGAACTCTCCTAGCCACTATAGCAAATTACTTGTGAACACACACACATATGTCTAGTAATGAAGTCAGGGTAAATCAATCACCTTTAGTAGGATCGAATAATTAATATCATTGCCTTGAGGAATAGTAATATTAAAGCATGTCCCACATCATTCAGGATGACCAAAGTCCAAA 2528 0.4142 MPEAPSHNLCNKPNGKIDDDGTSNTTSIIQHNNKKALNYIEDVTSNADEIQKRVLAEILSSNANVEYLQRHGLKGRTDRDTFKELMPVVTYEDLKPDIDRIANGDASSILCSKPISEFLTSSGTSGGERKLMPTIEDELERRSLLYSLLMPVMDQFVPGLDKGKGMYFLFIKSEAKTPGGLLARPVLTSYYKSSHFKNSTDRYDPYTNYTSPIETILCLDSYQSMYSQMLCGLFQNQQVLRVGAVFASGFIRAIKFLEKHWISLCRDIRNGTIDPEISDSSVREAIMKILKPNPKLADFIEGECKMESWKGIITRLWPNTKYVDVIVTGTMSQYIPILGYYSNGLPLVCTMYASSECYFGLNLNPLCEPSEVSYTLIPTMAYFEFLPLNKMKGHANSNSQPEQVHLVDLVDVELGQEYELVVTTYAGLYRYRVGDILRVAGFKNNAPQFNFVCRKNVVLSIDSDKTDEVELQNAVKNGAKHLAQFGSSLTEYTSCADTSTIPGHYVLYWEISTIDQTPIPGSVFEECCFAVEGSLNSVYRQGRVLESLGPLEIKIVENGTFDKLMDFAVSQGASINQYKTPRCVKYSPIVELLDSKTVSNYFSPKCPQWVPGHKKWCLYP 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03198 620 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 33 606 IPR004993 -
Pste1g03198 620 MobiDBLite consensus disorder prediction 1 24 - -
Pste1g03198 620 Pfam GH3 auxin-responsive promoter 40 585 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03198 Pste-Chr1 14533403 14538023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03198 26 603 EF-hand Containing Proteins AT1G23160 49.150 0.0 558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03198 1 14533403 14538023 Pste1g03198 1 14533403 14538023 ECH
Pste3g02843 3 21183999 21187124 Pste1g03198 1 14533403 14538023 PCT