Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02789 TTTGTGTTTGAGAAGACAAGGCAAAATTGAGAACCGACCGTTCTTAATCAGAAGTTGACATGGCAAGATCAAGACCGTTTGTCCATGTCTCTGAAAACGAAATGCCAAAAAGATGAGTGTTCCATGAAATGAAACCACTACCCTTTCATTTTCTCTCTCACTGTAGTGCTCACGGAGACAAAGCACTTCACCAGTGCATGCCCACCAAAGCAAAACCAAATATTTTCACCAAAGTCTGAGTCTTTTCGCCTTTGATAACCAAATTCGGGAACCCCAGATCTCGGGTGTAGCTGCTGATTTGGAAGTTTTATTCCCCCTCTGATTTACATTACTTTCCCGGAAAACGGCTTCCGGGGAAAGAAGTGAAGGAAGGGCGCATTGGGGTTTGGAAAAAGTTGAAAAATGCGGCGAAGAGCGACAGATTTTCGCAGGCCAGTGCGTAGGAGGGTTCCGGATGCGTTGTGGTGGGCATTGTGCTGTGCAGTGATTCTGCTCTTTGTCTATATTTTGAGCAAAGGGAACAAAATTGAGTCCAGACCTGCTTTGTCTAAGAGAACTTACCAGCATGATAAGATTATGGAAGGCCTTAATATTACTGAAGAGATGTTAAACTCTAACTCAGTCACGAGACAACTCAATGATCAGATATCCCTGGCAAAAGCTTTTGTTGTAATTGCAAAAGAAAGTAACAATCTCCAATTTGCTTGGGAATTAAGTGCCCAGATCCACAATTCACAGACGCTCCTTTCAAATGCTGCCACTAGGCGTGTTCCTTTAACAACCAGGGAAACAGAAAGGGCTATCCATGATATGGCGTTGTTGTTATACCAGGCCCAGCAGCTCCATTATGATAGTGCAACCATGATCATGAGATTCAAAGCAAAAATTCAAGCTCTTGAGGAACAAATGAATTCTGTTACTGAAAAGAGTTCAAAATATGGACAGATAGCTGCTGAAGAAGTTCCAAAAAGCCTGTATTGTCTTGGTGTCCGGTTGACAACAGAATGGTTCAAAAACTTTAATTTGCAAAAGAAATTGAAGGACAAAAGGCAAGTGGAGATGAAGCTCAAGGATAACAATCTTTACCACTTTTGTGTTTTCTCTGATAACATTATTGCAACTTCGGTTGTGGTTAATTCAACTGCAATGAATTCTAAAAATCCTAATATGATTGTTTTCCACCTTGTCACTGATGAAATAAACTATGCTGCAATGAAGGCGTGGTTTGCCATGAATGATTTCCGTGGGGTGACTGTGGAAGTTCAGAAGTTTGAAGACTTTACTTGGTTAAATGCTTCATATGTTCCTGTGCTCAAGCAACTTCAAGATTCAGAAATTCAGAGCTACTACTTTTCTGGCAACAGTGATGATGGAAGGACACCTATTAAATTTCGTAACCCTAAATATCTATCCATGCTTAATCACCTGAGGTTCTACATCCCTGAAGTTTTTCCTGCACTCAAGAAGGTGGTGTTCCTGGATGATGATGTTGTGGTTCAGAAGGATCTTTCTGGTCTTTTTACCATTGATTTGAATGGGAATGTAAATGGAGCTGTTGAAACATGCATGGAGACATTTCATAGATACCATAAATACTTGAACTACTCCCATCCTCTTATACGTGCACATTTTGATCCCGATGCTTGCGGATGGGCATTTGGGATGAATGTATTTGATTTGGTTGAATGGAGGAAAAAGAATGTAACTGGCATCTATCACTACTGGCAGGAAAAGAATGTAGACCGGACATTGTGGAAACTTGGTACTTTGCCACCTGGACTGTTGACATTTTACGGATTAACTGAGCCCTTGGATCCATCATGGCATGTTTTGGGTTTTGGCTACACCAATGTTGATGCTCAATTAATAGAGAGAGGAGCTGTACTACACTTCAATGGGAATTCCAAACCATGGTTGAAGATTGGGATTGAGAAGTACAAGCCACTATGGGAAAAATATGTTGAATACTCTCATCCTTTATTGCAACAGTGTAACTTCCATTGATTTTCTTTGACATTGAAATCAATACTTCAAACCTGGGTGGGAGATTTGTATCCGGAGTTAGTAGGGTCTGTTGATGGGACAGGAGAATATATCATTGGCTGTTTGTGGAACTGGTAGGCTTGGTGACCCTTACCGGACGAGTTAATTGATGTCTTAATTTGTAGTCAGAAATACTTGTACAATTTTAGAAGGTCAAGCATGTCTGGTGGCTTTAACTTGGTGCCTTCGTTGAAATCCGGATTTTCTGTTGTACCATAGACACGTCTATCAGTTCATAGTTTTCAAGTGTAATCAAGCATGGCCATGAGATCAGCTGCAAACTTCTTATTGTTCAAACTACTGCTCCTTGCAAGACCAGATGTTCTTTCCTATGGCATTTATTTGCTGAAACTTTATTCTCCTATTCTTGTTGCCATTTTCCAAAAGAAATTAGTATGTGATTTAGAATTCTGAATTTCCCATGTGTCACAAAACTATCTAGTTTATTTATTTCAGAAACAGATTCCAGCTGCATTTGTTGTTACATGCCTGTGTACAAGTATGTTACGGATATTTTGTACCTTATCTTAATAATCCAAAGATCAGCTTTGGATAATTAATATATCGAAAAATATTTGAG 2623 0.3973 MRRRATDFRRPVRRRVPDALWWALCCAVILLFVYILSKGNKIESRPALSKRTYQHDKIMEGLNITEEMLNSNSVTRQLNDQISLAKAFVVIAKESNNLQFAWELSAQIHNSQTLLSNAATRRVPLTTRETERAIHDMALLLYQAQQLHYDSATMIMRFKAKIQALEEQMNSVTEKSSKYGQIAAEEVPKSLYCLGVRLTTEWFKNFNLQKKLKDKRQVEMKLKDNNLYHFCVFSDNIIATSVVVNSTAMNSKNPNMIVFHLVTDEINYAAMKAWFAMNDFRGVTVEVQKFEDFTWLNASYVPVLKQLQDSEIQSYYFSGNSDDGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSGLFTIDLNGNVNGAVETCMETFHRYHKYLNYSHPLIRAHFDPDACGWAFGMNVFDLVEWRKKNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTNVDAQLIERGAVLHFNGNSKPWLKIGIEKYKPLWEKYVEYSHPLLQQCNFH 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02789 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 228 531 IPR029044 -
Pste3g02789 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 229 528 IPR029044 -
Pste3g02789 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 64 532 IPR029993 GO:0047262
Pste3g02789 533 Coils Coil 155 175 - -
Pste3g02789 533 CDD GT8_like_1 228 520 - -
Pste3g02789 533 Pfam Glycosyl transferase family 8 235 507 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02789 Pste-Chr3 20641366 20647800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02789 1 533 Glycosyltransferase AT2G20810 80.410 0.0 883
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02789 3 20641366 20647800 Pste3g02789 3 20641366 20647800 ECH
Pste3g02789 3 20641366 20647800 Pste1g03296 1 15111135 15113781 PCT