Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03296 ATGAGGCGAAGGAGTGCAGATTTTCGAAGACCAGGGAGGAGGAGGCTCCAGGATGTGGTGGGGTGGACATCATGCAGCGTTGTGCTTGTTTTCTTTATTTATATTCTCACCAAAGGCACCACCAAAATTGACTCCACGCACCAATTCTCCAGGAGAACATTCAGGCAGGACAGGATTATAGAAGGCTTCAATGTTACGGAAGAGATGTTAAGCCCTGACTCAGTGACTAGACAAATTAATGATCAAATCTCCCTTGCAAAAGCTTTTGTTGTAATTGCCAAAGAAAGTAATAATCACCAATTTGCTTGGGAGTTGAGTGCTCAAATCCGCATTTCACAGATTTTCCTCTCAAATGCTGCCACTAGGCGTGCTCCTTTAACGATCAAGGAATCAGAACATACTATCCGTGATATGGCATTGTTACTATATCAGGCACAACAGCTCCATTATGACAGTCCAACAATGATCATGCGACTGAAAGGAAAAGTTCAAGCTCTTGAAGAACAGATGAGTTCTGCAAGTGAGAGGAGTTCAAAATATGGACAAATAGCTGCTGAAGAAGTTCCAAAGAGTCTATATTGCCTTGGGGTCCGGTTGACATCTAAATGGTTCAAAAATCTTAGCTTACAGAAGAATTTGATGGACAAAACTCACAAAAGACAAGTGGAGATGAAACTCAAGGATAACGACCTTTACCATTTTTGTGTCTTCTCTGATAACATTCTTGCCACTTCAGTCGCGATCAACTCAACTGCAATAAATTCTAAAAATCCCGAGAAGGTTGTTTTCCACCTTGTCACAGATGAAATAAATTATGCTGCAATGAAGGCATGGTTTTCTTTGAACGATTTCAGAGGGGTTACAGTTGAGGTTCAAAAGTTTGAGGACTTCAGTTGGTTAAATGCTTCATATGTTCCCGTGCTTAAGCAGCTTCAAGACTCAGAGATACAGAACTATTACTTCAAAGGCAACAATGATGATAGCAGGACTCCTATCAAGTTCCGGAATCCAAAATATCTGTCCATGCTTAACCACCTGAGGTTCTACATCCCAGAAGTTTTTCCTGAGCTGAAGAAGGTGGTGTTCCTGGATGATGATGTTGTGGTTCAGAAGGATCTTTCTGAGCTTTTTTCCATAGATTTGAACGGCAATGTCAATGGAGCAGTTGAGACTTGCATGGAGACATTTCACAGATACCATAAATATTTGAACTACTCACACCCTCTAATAAGAGCACATTTTGATCCTGATGCTTGTGGATGGGCATTTGGGATGAATTTGTTTGATTTGGTTCAATGGAGGAATAGGAATGTAACTGGCATATACCACTATTGGCAAGAAAAGAATGCAGATAGAACATTGTGGAAACTTGGTACCTTGCCACCAGGGTTGTTAACCTTTTATGGGTTAACTGAGCCCTTGGATCCATCATGGCATGTATTGGGTTTTGGATACACAAATGTTGATCCTCAGCTGATAGAAAGAGGGGCCGTTCTGCACTTCAATGGGAACTCCAAACCGTGGTTGAAGATTGGAACGGAAAAGTACAAGCCTCTTTGGGAAAAATACGTGGATTATTCTCACCCTATATTGCAACAGTGTAATTTTCATTGA 1614 0.4114 MRRRSADFRRPGRRRLQDVVGWTSCSVVLVFFIYILTKGTTKIDSTHQFSRRTFRQDRIIEGFNVTEEMLSPDSVTRQINDQISLAKAFVVIAKESNNHQFAWELSAQIRISQIFLSNAATRRAPLTIKESEHTIRDMALLLYQAQQLHYDSPTMIMRLKGKVQALEEQMSSASERSSKYGQIAAEEVPKSLYCLGVRLTSKWFKNLSLQKNLMDKTHKRQVEMKLKDNDLYHFCVFSDNILATSVAINSTAINSKNPEKVVFHLVTDEINYAAMKAWFSLNDFRGVTVEVQKFEDFSWLNASYVPVLKQLQDSEIQNYYFKGNNDDSRTPIKFRNPKYLSMLNHLRFYIPEVFPELKKVVFLDDDVVVQKDLSELFSIDLNGNVNGAVETCMETFHRYHKYLNYSHPLIRAHFDPDACGWAFGMNLFDLVQWRNRNVTGIYHYWQEKNADRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTNVDPQLIERGAVLHFNGNSKPWLKIGTEKYKPLWEKYVDYSHPILQQCNFH 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03296 537 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 234 532 IPR029044 -
Pste1g03296 537 Coils Coil 156 176 - -
Pste1g03296 537 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 66 536 IPR029993 GO:0047262
Pste1g03296 537 SUPERFAMILY Nucleotide-diphospho-sugar transferases 232 535 IPR029044 -
Pste1g03296 537 CDD GT8_like_1 232 525 - -
Pste1g03296 537 Pfam Glycosyl transferase family 8 239 511 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03296 Pste-Chr1 15111135 15113781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03296 1 537 Glycosyltransferase AT2G20810 77.407 0.0 852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03296 1 15111135 15113781 Pste1g03296 1 15111135 15113781 ECH
Pste3g02789 3 20641366 20647800 Pste1g03296 1 15111135 15113781 PCT