Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02780 CAACAAACAAACAAACACGGAGGAGAAACCGTTCATTTGTATTCCCCTCGATATCCGTGTTTGGCATGAGTAGCTACGACACCAACCCCTTCGCTGATGAAGAGGTTAATCCCTTCGCCGATGGAAGCGTTAAAGGAAAAGGATCGGGGCAATCAAATCGTGGTGGTGGTGGAACATCCGATACTACTCTTTCACCCCTGTCTCCTGAGCCTTATGATCGTGCAACAACTGTTGACATTCCCCTCAATACCTCAAATGTAGACCATGCTACCAACGATCTCAAAGCGAAGGAGAAGGAGCTCCAAGCTAGAGAGGCTGAATTGAAAAGAAGGGAACAGGAGCTAAAACGGAGGGAAGATGCTATAGCACGAGCTGGAATAATTATAGAGGAGAAAAATTGGCCACCTTTTTGCCCCATCATCCATCACGACATTGCAAACGAAATACCAATACATCTTCAATCAATCCAGTATGTGGGATTTACAACATGGCTGGGTTTGATTTTATGTCTTCTATGGAATATTGTAGCAGTTACTGTAGCTTGGGTCAAAGGAGAAGGTCTTTCAATCTGGTTTCTATCTATCATATATTTTATATCCGGTGTTCCAGCATCCTATGTGACGTGGTATCGCCCTCTTTATCGTGCCACAAGAACGGATAGTGCTCTAAAGTTTGGCTGGTTTTTCTTGAGTTACGGGGTACACATTATCTTTTGCGTTTTTGCTGCAGTTGCTCCTCCAATTGTCTTCAAAGGGAAATCTCTCACAGGTATTTTGCCTGCCTTTGAGGTTTTGGACTACAATACAACGGTTGGGATACTTTACTTTATTGGGTTTGGATTTTTCTGCATTGAATCCTTGATGAGCATTTGGGTCATTCAGCAAGTATACATGTACTTCCGGGGCAGTGGAAAGGCTGCAGAGATGAGGCGTCAAGCTGCACAAGGAGCTATGATGGCAGCTTTATGACAAGGCAACCAAGTGTGGAAAATGGCACTTGCACATGTATTTACAGATGTTTGCACCTGTAATATTGATTTCCTGCTGCCAGTTTCTTGTGCCTCTAGTAGGATGTTTTACTCTATAGGTTTTGGCCTAGGATTTCAGTCAGACTAGATGGTTAACATAAACTCTAGTTGTGCATACATAGGACTACATTATATGAGAATTTAAATACTCC 1179 0.4292 MSSYDTNPFADEEVNPFADGSVKGKGSGQSNRGGGGTSDTTLSPLSPEPYDRATTVDIPLNTSNVDHATNDLKAKEKELQAREAELKRREQELKRREDAIARAGIIIEEKNWPPFCPIIHHDIANEIPIHLQSIQYVGFTTWLGLILCLLWNIVAVTVAWVKGEGLSIWFLSIIYFISGVPASYVTWYRPLYRATRTDSALKFGWFFLSYGVHIIFCVFAAVAPPIVFKGKSLTGILPAFEVLDYNTTVGILYFIGFGFFCIESLMSIWVIQQVYMYFRGSGKAAEMRRQAAQGAMMAAL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02780 300 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 4 297 IPR007273 GO:0015031|GO:0016020
Pste3g02780 300 Coils Coil 65 99 - -
Pste3g02780 300 MobiDBLite consensus disorder prediction 24 48 - -
Pste3g02780 300 Pfam SCAMP family 109 280 IPR007273 GO:0015031|GO:0016020
Pste3g02780 300 MobiDBLite consensus disorder prediction 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02780 Pste-Chr3 20590815 20604365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02780 2 272 Miscellaneous Gene Families AT1G61250 67.153 8.19e-133 376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02780 3 20590815 20604365 Pste1g03315 1 15200363 15207774 PCT