Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03315 TGCAGATTTTGCGTTTGTGTGTAGTATTTGTGGGAGGAAACAAACAGAATCGGAAAGAGAGGAAGCCGTAGATACCAAGGCCTTCTCTCTCTGTCACTCACACACACATTGCAGCATCCATTTCTCTCTTTTACTCCAATTCCCAAATATGAGTCGCTACGATCCCAATCCCTTCGAGGAAGACGTCGAAGTTAATCCTTTCGCGGATGGAGCAGCTAAAGGAAAAGGGTCGGGACAATCAAGTTATAGTGGAGGTGCATTTTATACTACTAACCCTGGAAGTGTTCCCTCTGCAACCTCAAGGCTCTCACCCCTTCCTCCAGAGCCTTATGATCGTGGGGCAACTATTGACATCCCCCTTGATAATTCAAAGGATGTCAAAGCAAAGGAGAAGGAACTTCAAGCTAAAGAGGCTGAATTGAAAAAAAGGGAACAGGAACTAAAACGAAGGGAAGATGCTATAGCACGAGCTGGAATAGTTATAGAGGAGAAAAATTGGCCACCTTTTTTCCCCCTCATTCATCATGACATTGCTAAGGAAATACCAATACATCTTCAAAGGATCCAGTACATTGCATTTACAACATGGTTGGGTTTGGTTCTGTGTCTTTTATGGAATATTGTGGCGGTTACTACTGCTTGGATCAAAGGAGAAGGTCCAACCATATGGTTTCTTGCAATTATCTATTTTATTTCTGGTGCTCCAGGATCCTATGTGTTGTGGTATCGCCCTCTTTATCGTGCTATGAGGACTGACAGCGCTCTGAAATTTGGCTGGTTTTTCTTGCTTTACATGGCAAGTTTTGTGTATTTTCCTTCTATAGTGCACATTGCCTTTTGCATTTTGGCTGCAGTTGCTCCACCAATTATCTTCAAAGGAAAATCTCTTACAGGTATTTTGGCTGCGATTGACGTGTTGGGCGACAATGCATTGGTTGGGATATTCTACTTTATTGGGTTCGGATTTTTCTGTCTTGAGTCATTGCTGAGCATTTGGGTTATACAGCAAGTATATATGTACTTCCGCGGCAGTGGCAAGGCTGCAGTTTTAAAGCGTGATGCTGCGAGAGGGACAATGATGGCTGCTCTATGACGTGGCACTTGCAAATGTTATCCCAATGGTTATACCCAAAAAATGATTTCTCGACTTACCAGTTCCTTACACACTTATTGCGCTTTCTTTAATAGTTGGATTTGATTTGTTTTCTTAGGTTTTGGAGTAGGGTTGAGTCCAACCAGGTAATTAAGATAGAAGCTTAGTTGTGCATATATAGAAAACTTTGTTTGAGATAGCCCGTTTACAAATTATTTATTTCAGCATTTTTTATATTTTTATTAACAAAATACTCCATCTATTCGTAAGTTTAAATGTTCTGTTTGTTGGCTTGACTGTCGGGTGAAAGTAATCAAAAGAAATAAACAAGTGAATCACCCGGTGCAACTTCTGTAAAATAACAACTTTTAGTTTTTTCAGATGTTTGTATGTGCTTTTCAAAATATTAAATCAAA 1509 0.4003 MSRYDPNPFEEDVEVNPFADGAAKGKGSGQSSYSGGAFYTTNPGSVPSATSRLSPLPPEPYDRGATIDIPLDNSKDVKAKEKELQAKEAELKKREQELKRREDAIARAGIVIEEKNWPPFFPLIHHDIAKEIPIHLQRIQYIAFTTWLGLVLCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGAPGSYVLWYRPLYRAMRTDSALKFGWFFLLYMASFVYFPSIVHIAFCILAAVAPPIIFKGKSLTGILAAIDVLGDNALVGIFYFIGFGFFCLESLLSIWVIQQVYMYFRGSGKAAVLKRDAARGTMMAAL 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03315 314 Pfam SCAMP family 114 294 IPR007273 GO:0015031|GO:0016020
Pste1g03315 314 MobiDBLite consensus disorder prediction 1 65 - -
Pste1g03315 314 Coils Coil 74 104 - -
Pste1g03315 314 MobiDBLite consensus disorder prediction 27 52 - -
Pste1g03315 314 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 4 311 IPR007273 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03315 Pste-Chr1 15200363 15207774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03315 3 314 Miscellaneous Gene Families AT1G11180 65.517 9.80e-143 402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02780 3 20590815 20604365 Pste1g03315 1 15200363 15207774 PCT