Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02772 CTCAGTTCCACCACCAATGGCACCCCCACTCGTGACTTTGATATCATTACCTGGTTTGAACAAGTGTCCAGCAATGCTGGTTTTGTTCAGACTCAAACACTAAGTAAGATTCTTAAGCAGAACTATGGGGTTGAATATTTGAAGAAATGCTTCGGAAGCTACAATATCTCAGACATGGATGCATCTGCCTTGGAATCTCTTTTCACTTCTGTGGTTCCCCTTGCTTCACATTCAGATTTTGAGCCATATATCCTAAAAATAGCAGATGGAGACACAGGTCCTATACTCACACAACAACCCATCACTACCCTTTCCTTAAGTTCTGGAACCACAGAGGGAAGCCAAAAGTTCGTACCCTTTACCCGCCATAGTGCTCAAACGACCCTTCAAACTTTCACTTTATCAGCAGCCTATAGATCAAGGGTTTATCCCACAAGGGAAGGAGGGAGAATTCTTGAGTTCATTTACAGTAGCAATCAGTTCAAAACAAAAGGGGGCTTGAATGTTGGAACAGCCACAACACACTACTATGCAAGTGAAGAATTCAAAGTTAAACAAGAGAAAACAAAAACATTCACTTGCAGTCCGTACCAAGTTATTTCGGAAGGAGAATATAAACAATCCACCTACTGCCACCTCCTTCTTGGCCTCTTCTTCTCTGATCAGATAGAGTTTATTTGCTCAGCTTTTGTGTATAGCATAGTGCAAGCCTTTCGCACTTTGGAAGAGGTTTGGAAAGATCTTTGCAATGACATAAGAGATGGTACTTTGAGTTCAAGAATCAAGTTACCCAAAATGAGAGAGGCTGTTTTGGGGATCATCTCTTCAAACCCCTCTTTGGCCTCAAAACTAGAAGCAGCTTGCTTAGAGCTAGAATTGGTGGATTGGTTTGGTATGGTTCCCAAACTTTGGCCAAATGTCAAGTACCTTTATTCAATAATGACAGGATCTATGCAACCTTACTTGAAAAAGCTTAGGCATTATACAAATGAGATGCCACTAATAAGTGGTGACTATGGTTCAACTGAGAGTTGGATAGGGGTTAATGTGGATCCTAGTTTGCCTCCAGAGAAAGTAACCTTTGCTGTAGTACCCACGTTCTCTTACTTAGAGTTCATACCACTTTATAGACAGAAACCAGAAGATTGCAGCTCAGCAGCTGTTCATGATTTCATGGAAGATGATCCAATCCCTCTATCCCAGGTTAAAGTTGGACAAGAGTACGAAATAGTGCTCACAACTTTTACCGGGTTGTACAGGTGCAGACTAGGAGATGTGGTGGAGGTGGCAGGTTTTCACAATGGGACCCCAAAACTGAACTTTATATGCAGAAGAAAACTAATTCTAACCGTGAATATTGACAAGAACACAGAGAAAGACCTTCAGATAGTGGTAGAGAAAGGGTCACAGCTACTAAACAAGGCCAAAGCTGAGGTGGTTGATTTTACAAGCTATGCAGATGTGTCAAAGGAACCAGGTTGTTACGTCATTTTCTGGGAGATCAAAGGTGAGGTGGAGGATAAGGTACTTGAGGCATGTTGCAGGGAAATGGATGCAGCTTTTATTGACCATGGTTATGTGGTGGCCAGGAAAACCAGTTCAATAGGGCCTTTGAAGCTTTGCATTGTTAAGAGAGGAACTTTTATAAAGGTTTTGGATTATTTCATGGAGAATGGGGCTGGACTGGGCCAGTTCAAGACCCCTAGGTGCACCAACAACCCGGACCTCCTCAAATTGCTCTCTGCATGCACCACTAAGACATTTCGCAGCACTGCTTACAGTGAAATCCACTCATGATCCATGCAAGCTCACATCCTTCGGGGTGTTTCTAATGGTTTTCTTCTACCATTCAGCCTG 1857 0.4265 LSSTTNGTPTRDFDIITWFEQVSSNAGFVQTQTLSKILKQNYGVEYLKKCFGSYNISDMDASALESLFTSVVPLASHSDFEPYILKIADGDTGPILTQQPITTLSLSSGTTEGSQKFVPFTRHSAQTTLQTFTLSAAYRSRVYPTREGGRILEFIYSSNQFKTKGGLNVGTATTHYYASEEFKVKQEKTKTFTCSPYQVISEGEYKQSTYCHLLLGLFFSDQIEFICSAFVYSIVQAFRTLEEVWKDLCNDIRDGTLSSRIKLPKMREAVLGIISSNPSLASKLEAACLELELVDWFGMVPKLWPNVKYLYSIMTGSMQPYLKKLRHYTNEMPLISGDYGSTESWIGVNVDPSLPPEKVTFAVVPTFSYLEFIPLYRQKPEDCSSAAVHDFMEDDPIPLSQVKVGQEYEIVLTTFTGLYRCRLGDVVEVAGFHNGTPKLNFICRRKLILTVNIDKNTEKDLQIVVEKGSQLLNKAKAEVVDFTSYADVSKEPGCYVIFWEIKGEVEDKVLEACCREMDAAFIDHGYVVARKTSSIGPLKLCIVKRGTFIKVLDYFMENGAGLGQFKTPRCTNNPDLLKLLSACTTKTFRSTAYSEIHS 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02772 598 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 15 593 IPR004993 -
Pste3g02772 598 Pfam GH3 auxin-responsive promoter 18 574 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02772 Pste-Chr3 20513094 20519500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02772 3 591 EF-hand Containing Proteins AT1G23160 33.940 1.04e-114 352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02772 3 20513094 20519500 Pste3g02772 3 20513094 20519500 ECH
Pste3g02772 3 20513094 20519500 Pste1g03330 1 15282011 15285964 PCT