Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03330 ACCATTTCTTGTGGTCTATATCTATTGTATTGTACCATATCTATGAAACTTCTGCAAATATCAGAGGTTTGTTCAACCTTTTGAATAAAGCACATATAAGCTCTAGACCAATGTAAAATAGTGGGTTTTTTTTCATTTTTCTTTTGCTATACTTCCCTCACTCAGAGACAGACCTTCACCAACAACACTATTATTACTTTCACTACCCTCAACTATTCCTCATGCCGCAGCACCAACCAACTCTAATGGAGCCTGCTCTCAGTTACAACAATGGCAATGGCAATGGCAACAGTGTCTATGATGTCATAAGCTGGTTTGAAGATGTATCTCAGAACGCTGCTTTTGTTCAGACTCAGTTGCTGTCCCAGATTCTCAAGCAGAACTACGGGGTGGAATATCTCAAGAAATGGCTGGGGAGCTACAATATCCTTGAGATGGATGCATGTGCATTGGAATCCCTTTTCTCTTCTGTGGTTCCCCTTGCCTCACATGCTGATTTTGAGCCATTTATCCAACGGATTGCAGATGGGGACACAGCTCCTTTACTCACTCAACAACCCATAACCACTCTTTCCTTAAGTTCTGGAACCACAGAGGGGAGGCAGAAGTTCGTACCCTTTACCCGCCACAGTGCACAAACCACGCTTCAAATATTCACCCTAGCAGCAGCCTATAGATCAAGGGTTTATCCCATAAGGGAAGGTGGAAGGATTCTTGAATTCATATACAGCAGCAACCGGTTCAAAACAAAAGGAGGTTTAACAGTAGGAACAGCAACGACACACTACTATGCTAGTGAAGAATTCAAAATCAAGCAGCATAAGACCAAGTCATTTACTTGCAGCCCTGAAGAAGTGATTTCTGGAGGAGACTATAAGCAATCCACATATTGCCACCTCCTTCTTGGCCTATTTTTCTCTGACCAAGTGGAGTTTATAACCTCAGCTTTTATCTATAGTATGGTGCAAGCTTTCAGCAGTTTTGAAGAACTTTGGGGAGAAATTTGCAATGACATAAGAGATGGCACACTGAGTTCAAGGGTAAAGTCACCCAAAATGAGAAGGGCTGTTTTGGACATTATCTCCCCAAACCCAAATTTGGCTTCGAAGTTAGAAGCTGCTTGCCAGGAGCTAGAAATGATGGAATGGTTTGGTTTCATTCCAAAACTTTGGCCAAATGCTAAGTATGTGTATTCCATAATGACAGGGTCCATGCAACCATATTTGAAAAAACTTAGGCACTACGCTAATGGGTTGCCTTTGGTTAGTGCTGACTATGGCTCAACTGAGAGCTGGATAGGGGTTAATGTTGACCCTAGTTTACCACCAGAAGATGTAACTTTTGCTGTGGTTCCCACATTTTCTTACTTTGAGTTCATACCACTTCACAGGGATGAAAAAAATTTCAGTTCAGGAGCTGATGATTTCATAGAAGATAAGCCAATTCCACTATCTCAGATTAAGGTTGGACAAGAGTATGAAGTAGTCCTCACAACTTTCACCGGATTGTACAGGTGCAGGTTAGGGGATGTGGTGGAAGTGGGTGGCTTCCACAATGGGACCCCAAAGTTGAACTTTGTGTGCAGAAGGAAGCTAATACTGACAGTAAATATAGACAAGAACACAGAAAAGGATCTTCAGCTAGTGGTAGAGAGGGGGTCCCATATGCTGAACAAGGCAAAAGCTGAGATTGTTGATTTCACTAGCTGTGCTAATGTCTCAAACCAACCGGGGCACTATGTAATTTACTGGGAGATCAAGGGGGAGGTTGAGGACAAGATACTTGGTGCTTGTTGCACTGAAATGGACAAATCTTTTGCCGATCATGGCTATGTGGTATCAAGAAAAACCAATTCAATTGGGCCCTTAGAACTGTGCATCTTGGAGAGTGGGACTTTCAAGAAGATTTTGGACAACTTCATAGCTAATGGGGCAGCTCTTAGCCAATTCAAGACCCCCAGGTGCACCAATAATCCTGTCCTACTTAAAATTCTTAACAGGTGCACCGCCAAAAAGTTTCGTAGCACAGCTTACAGTCCAAATCAAATA 2048 0.4253 MPQHQPTLMEPALSYNNGNGNGNSVYDVISWFEDVSQNAAFVQTQLLSQILKQNYGVEYLKKWLGSYNILEMDACALESLFSSVVPLASHADFEPFIQRIADGDTAPLLTQQPITTLSLSSGTTEGRQKFVPFTRHSAQTTLQIFTLAAAYRSRVYPIREGGRILEFIYSSNRFKTKGGLTVGTATTHYYASEEFKIKQHKTKSFTCSPEEVISGGDYKQSTYCHLLLGLFFSDQVEFITSAFIYSMVQAFSSFEELWGEICNDIRDGTLSSRVKSPKMRRAVLDIISPNPNLASKLEAACQELEMMEWFGFIPKLWPNAKYVYSIMTGSMQPYLKKLRHYANGLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVVPTFSYFEFIPLHRDEKNFSSGADDFIEDKPIPLSQIKVGQEYEVVLTTFTGLYRCRLGDVVEVGGFHNGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVERGSHMLNKAKAEIVDFTSCANVSNQPGHYVIYWEIKGEVEDKILGACCTEMDKSFADHGYVVSRKTNSIGPLELCILESGTFKKILDNFIANGAALSQFKTPRCTNNPVLLKILNRCTAKKFRSTAYSPNQI 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03330 609 Pfam GH3 auxin-responsive promoter 31 584 IPR004993 -
Pste1g03330 609 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 27 604 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03330 Pste-Chr1 15282011 15285964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03330 27 602 EF-hand Containing Proteins AT1G23160 34.856 1.13e-119 365
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03330 1 15282011 15285964 Pste1g03330 1 15282011 15285964 ECH
Pste3g02772 3 20513094 20519500 Pste1g03330 1 15282011 15285964 PCT