Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02558 GAAAACATAAAATGCCAAGTATGATGCCGTTGTCCTCAGAAGGGAACGAACTCCGGTCACCGGAGGCGAGAAAGAAAGTGTGCATCGACGAGATGCTCCGAAAGTACTGCGGCGAGTTCGGGCCGTGGCAGCTTAAGCACTTTGTCCTCACCAGCTTTGCTTGGGTCTTCGCGGGCTTTCACACCATGGTCATGGTTTTTGCCGATCATCAGCCACACTGGAAATGCCTCACCGGCTCCGCCGGTTCCGGTTGCAACGCGACCGCCGGTTCCCTATGCCGACTGGAACCGGGTTCCTGGGAGTGGGTCGGAGCCCGCACCACCGTGTCGGAGTGGGGTTTATTTTGTGATCACAATTTTAAGGTTGGGTTGGTCCATGCCTTCTTCTTCCTCGGCTGCATGATCGGTGCTGGGGTATTTGGCCACTTATCAGATTCGTTTATGGGAAGAAAACGCACGCTTGGAGTGGTGTGTGGGCTGAACGGCATATTTGGGTGCTTAACAGGACTCTCCCCTAACTACTGGACCTATGTGATCCTTCGCCTGATGACAGGTTTCAGCACCGGTGGCGTTGGCCTCTGCGCCTTCGTCTTAGCCACCGAGCCAGTGGGCTCCACAAAACGTGGCGTCGCTGGAATGTCCACTTTCTATTTTTTCTCTGGTGGAATCGCACTTCTCACAGGAATCGCATTCATCTTCCAAACATGGCGCTATCTCTACATAGCTTCCTCCATCCCCTCCTTTCTCTACACCATCATTGTGCTTCCCTTTGTGTCCGAATCCCCAAGATGGTACCTCGTACGAGGGAAAGTAACCGAAGCGACAAAACTCATGTCAACCATCGCTTCTTACAACAAAAAACACCTCCCCGACGATGTTATCCTCGCACTTGACGAAGAAACAAGGACAGATACCGATAACAAAAACAAAGGCGCACGTGTTGGATCCATCGTTGACGTTGTTTGTTCGCCCATCACACGTGTGCGGCTACTAATAGCGGTAGCACTTAACTTCTTTGGGTGCTTGGTGTACTACGGTCTTAGCCTAAACGTGGTGAACTTAAAAATGAACCTTTGCTTGAACGTGTTGGTGAACGCGGTGGGGGAGATGCCGGCGTTTGTGATAACGGCGATGCTTTTGGACAGATATGGACGGAAACCGTTAACGGTGGCGACGATGTGGTTCAGCGGGTTGTTTTGCTTGATGGGGAGTGTGATAAGGAATGTAGGGGTGTGGAAGGTGGTGAGAATGGTGTGTGGTGTGTTGGGGATATTTGGGATGGCGGGGACATATAATTTGCTATTTATTTACACGGCGGAGCTTTTTCCCACGGTGGTGAGGAACGCCGCGCTGGGGTGTACGACACAGGCGGCGCAAATGGGAGCCATATTGGCACCGATTGTGGTGGGTTTCGGTGGTTGGTTGCCGTTTGCGGTATTCGCTGGTTGTGGGATAGTGGGAGGGGTCTTTGCCCTTTTTCTTCCGGAGACCCTAAACCAACCTCTCTATGATACATTCACTGGAATGGAAGCTGGACTTGTATCTGCT 1547 0.5204 MPSMMPLSSEGNELRSPEARKKVCIDEMLRKYCGEFGPWQLKHFVLTSFAWVFAGFHTMVMVFADHQPHWKCLTGSAGSGCNATAGSLCRLEPGSWEWVGARTTVSEWGLFCDHNFKVGLVHAFFFLGCMIGAGVFGHLSDSFMGRKRTLGVVCGLNGIFGCLTGLSPNYWTYVILRLMTGFSTGGVGLCAFVLATEPVGSTKRGVAGMSTFYFFSGGIALLTGIAFIFQTWRYLYIASSIPSFLYTIIVLPFVSESPRWYLVRGKVTEATKLMSTIASYNKKHLPDDVILALDEETRTDTDNKNKGARVGSIVDVVCSPITRVRLLIAVALNFFGCLVYYGLSLNVVNLKMNLCLNVLVNAVGEMPAFVITAMLLDRYGRKPLTVATMWFSGLFCLMGSVIRNVGVWKVVRMVCGVLGIFGMAGTYNLLFIYTAELFPTVVRNAALGCTTQAAQMGAILAPIVVGFGGWLPFAVFAGCGIVGGVFALFLPETLNQPLYDTFTGMEAGLVSA 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02558 512 ProSitePatterns Sugar transport proteins signature 2. 179 204 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pste3g02558 512 ProSiteProfiles Major facilitator superfamily (MFS) profile. 43 495 IPR020846 GO:0022857
Pste3g02558 512 Pfam Sugar (and other) transporter 115 499 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pste3g02558 512 SUPERFAMILY MFS general substrate transporter 39 498 IPR036259 -
Pste3g02558 512 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 36 498 - -
Pste3g02558 512 Gene3D MFS general substrate transporter like domains 39 502 IPR036259 -
Pste3g02558 512 ProSitePatterns Sugar transport proteins signature 1. 372 388 IPR005829 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02558 Pste-Chr3 18472891 18478927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02558 6 506 Organic Solute Cotransporters AT3G20660 63.883 0.0 648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02558 3 18472891 18478927 Pste3g02558 3 18472891 18478927 ECH
Pste3g02558 3 18472891 18478927 Pste1g03778 1 18614990 18620948 PCT