Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03778 TGCAGTTTTAAGAAAAAGTCTCATGTGCGAGGAAGAAAGCGAGAAGCAGATCTAAACAAATGCCAACGACGTCGTCGAGAACTGCGGAAAACTGGGAAGCGAATTCGAGGGAAACGCCGCTCCTACAGGCGGCGGAGAAGGAAGGGGGAGAGAGGGCGGTGGTGGAGAGGCTATGCATCGACGAGATGCTGCAGAAGTACTGCGGGGAGTTCGGGCGGTGGCAGCTGAAGCACTTCATGCTGACGAGTCTGGCGTGGGCCCTTGAAGCGTTCCACACGATGGTGATGATATTCGCGGACCGCGAGCCCGAGTGGCGGTGCGTCGAGGGTGCGGCTGGGTCGCGGTGCCATTCGGGCGCGTCCAGCGTGTGCGGGCTCGAACCGGGCTCGTGGGAGTGGGTTGGGGACTCCACTGTGGCCGAGTGGGGCCTTTTTTGCACTGACAAGTTTAAGGTGGGGCTCGTTCAGGCCGTATTCTTTGGCGGCTGCATGATCGGTGCTGGAATATTTGGTCACTTATCGGACTCATTTATGGGAAGAAAAGGTTCTCTGACAGTGGTGTGTGCCCTAAACACAGTATTTGGCACCTTAACAGCCTTCTCTCCCAACTACTTCTTCTATGTCTTCTTCCGCCTCCTCACCGGGTGCAGCACCGGCGGCGTTGGCCTCTGCGCATTCGTCCTCGCCACGGAGCCCGTCGGCCCCAAAATGCGCGGCACCGCCGGCATGTCCACCTTCTACTTCTTCTCCACAGGCATCGCCATCCTCTCCGCCATCGCTTACATCTTCCCCACATGGCGAAAACTCTACATAGCCTCTTCCCTCCCCTCTCTCCTCTTCCTCCTCTTCATCCTCCCCTTCATCTCCGAGTCCCCCAGATGGTACCTCGTTCGAGGAAGGACCAACCAAGCAAGAAAAATCATGGCCACCATCGCCGCCACAAACGGTAACCACCTTCCTCCAACGGCTCGTCTCACCCTCGACGATCATCAGTCAGCACCACCACTCTCACCGCCACCATCCTCATTTATGTCCAAAGACCCTCAAGAGGATGATGGTATATTGGGTTCTTTTGCCTCCTCATGCGACGTCGCAGTCACAGCAGGCTCTCTTATCGATGTCATTCGCTCCCGACTCACTAGGGCGCGTTTGGTTCTCGCTGTTGTAATAAACTTCTTATGCTCGGTAGTGTACTACGGGTTAAGCCTCAATGTTGTAAACCTAGAAACGAACCTGTACCTCACGGTGATCCTCAACGCCGTGGCGGAGATGCCGGCGTTCATGATAACGGCGATGCTGCTGGACCGGCTTGGGAGGAAGCCGTTAACCATAGCCACCCTATGGTTCAGCGGTGCGTTTTGTTTGGCGGGAAGCTTGGTGGGCAACGTTGGCATATGGAAAGGCGTCAGAATGATATGTGGGATTTTAGGGATTTTCGGAATGGCGGGAACGTACAACTTGCTGTTCATTTACACGGCGGAGCTGTTTCCCACGGTGGTCAGGAACGCCGCGCTAGGCTGCGCCACCCAGGCCGCGCAGATGGGTGCAATATTGGCGCCGCTGGTCGTCGTTTTGGGAGGCTCATTGCCGTTTACTGTGTTCGCTTTGTGCGGAATAGGTGGCGGCCTTTTCGCGTTTTATCTGCCCGAGACGCTCAACCAACCTCTCTTTGATACGCTAACCGGAATGGAGGCCAAGGGAAACGCTGTTACCTCAACCCATGTATGATTCTGCTTTCGTTTTTCTTTTCAGCTTTTTCTTCATATTCCCTGTTTGTTTCGTACTGTAATTTTATATTATGTTTCCAATATAATTTATCATGTGCTGTTGTTTCAATCTATGTATCTGTCTACCTTTCAGTTCATTTTGTTTAGATTACTGTAATGTTAGTAATGTTAATTTTTACATTTTTATTAGTGAGAAGA 1924 0.5301 MPTTSSRTAENWEANSRETPLLQAAEKEGGERAVVERLCIDEMLQKYCGEFGRWQLKHFMLTSLAWALEAFHTMVMIFADREPEWRCVEGAAGSRCHSGASSVCGLEPGSWEWVGDSTVAEWGLFCTDKFKVGLVQAVFFGGCMIGAGIFGHLSDSFMGRKGSLTVVCALNTVFGTLTAFSPNYFFYVFFRLLTGCSTGGVGLCAFVLATEPVGPKMRGTAGMSTFYFFSTGIAILSAIAYIFPTWRKLYIASSLPSLLFLLFILPFISESPRWYLVRGRTNQARKIMATIAATNGNHLPPTARLTLDDHQSAPPLSPPPSSFMSKDPQEDDGILGSFASSCDVAVTAGSLIDVIRSRLTRARLVLAVVINFLCSVVYYGLSLNVVNLETNLYLTVILNAVAEMPAFMITAMLLDRLGRKPLTIATLWFSGAFCLAGSLVGNVGIWKGVRMICGILGIFGMAGTYNLLFIYTAELFPTVVRNAALGCATQAAQMGAILAPLVVVLGGSLPFTVFALCGIGGGLFAFYLPETLNQPLFDTLTGMEAKGNAVTSTHV 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03778 555 MobiDBLite consensus disorder prediction 309 328 - -
Pste1g03778 555 SUPERFAMILY MFS general substrate transporter 125 535 IPR036259 -
Pste1g03778 555 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 51 539 - -
Pste1g03778 555 ProSitePatterns Sugar transport proteins signature 1. 410 426 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pste1g03778 555 Gene3D MFS general substrate transporter like domains 103 539 IPR036259 -
Pste1g03778 555 ProSiteProfiles Major facilitator superfamily (MFS) profile. 58 533 IPR020846 GO:0022857
Pste1g03778 555 Pfam Sugar (and other) transporter 375 537 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pste1g03778 555 Pfam Sugar (and other) transporter 128 294 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03778 Pste-Chr1 18614990 18620948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03778 7 544 Organic Solute Cotransporters AT3G20660 65.257 0.0 666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03778 1 18614990 18620948 Pste1g03778 1 18614990 18620948 ECH
Pste3g02558 3 18472891 18478927 Pste1g03778 1 18614990 18620948 PCT