Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01581 CATTATTACGTTGGGGACACAACCATATCCACCAAAATTTCCAACACTATCATAAGCTATTTAATCACCAACATGTGCACCAATCCATCATTAACGGTGCAATTTCCCCTTTGTGTCTGCACAAGAAACACCACACTCGCAATTGCCACAAGAAAGAATAACAATAATAATAATAGTTGGTTCTTGAGCCAACAACACAAACTCTTTCTCCCAAGTTCTCGGGTGCATAGAGAGGTTCGAATAGGTAGTGTTTCTTGGCGTGTGGAAGCCGTGATGATGAGAAAAAGTGGCACCAAAAACACCACTAAGGGTCAAAATGTGAAGGCCATAGTGACTGTGAAGGGAAGTGGTGGAGGGTTACTAAATGTTGTTAGGGATGGTGTTGAAGCCATTGAAGGGTTGGTTGGGAGAACACTTGTTTTGGAGCTTGTGAGCATTGAGCTTGATTCAAAAACAAACTCAGAGGCAAAGACAATAAAAGGTGATGCACACAAGAGTGAGGAAAAGGATGATGAGGTGTATTATGAGGCCACATTTGAGTTACCATCAGACTTTGGAAAAGTGGGTGCTGTTTTGGTTGAGAATGAACTTCACAAAGAGATGTTTTTAAAGAGTATAGTTCTTGATGGCTTCCCTGATGGTCCAGTGCATCTCACCTGTGAATCATGGGTTGAGGGAAGAAGAATTGAAGCTGCTAAGAGGAAATGGGAAGGAGAACGTAAGGACTCTGATAGAATTTATGACTATGATGTATACAATGATCTTGGAGATCCTGATTCTAATCCTAACCTTAAAAGACCAATTCTTGGTGGCTCTAAACAATATCCATACCCAAGACGGTGTCGTACTGGCCGAGACCACTCTAACTCAGATCCAATGTATGAGAAGAGAAGTTCAGATTTCTATGTTCCTCGTGATGAGACATTTTCTGATATAAAAGAGTCACAGTTCAATAAGAGCACAATATCCTCAGGACTTAGTGCAATTTCAGAAACCTTAGATGCAATTCTCACTGACCAAAATCTTGGATTTACAAGCTTTGAAGACATAGACACTATCTACAAAGAAGGGTTTCATTTACCACCACTCAAAGACAATAATGGCCTAAATTTCCTCCAAAGAGTAATTCCAAGGTTGATCAAGGCTGTTAATGATACCCAGAATCTTCTGCGGGACAGATTCTTTTGGATTTCAGATGAGGAGTTTGCTAGGGAGACTTTGGCAGGGGTGAACCCATATAGCATTCAATTAGTCAAGGCAAGAGAGTGGCCTCTGAGAAGTAAATTGGAACCCCAAATATATGGTCCACCAGAATCAGCTATCACCAAAGAAGTTATAGAGTCACATATAGTTGACTATCATGATATACTCTTACCATATGTAAGCAAAGTTAGAGAGGTTGAAGGAACCACACTATATGGATCACGCACATTATTCTTCCTCACTGAACAAGGAACATTGAAGCCACTATCTATTGAGCTCACTAGGCCACCTATGAATGGAAAGCCACAATGGAAGCAAGTCTTCACACCGTTGAGAACTCATGCTGTCATGGAACCCTTTGTCATCGCAACAAATAGGCAACTTAGTGCCATGCATCCAATCTACAAATTACTGCATCCACATTTGAGATTTACTATGGCTATCAATGCATTTGCTCGTGAAATACTTATCAATGCAGATGGGATCATTGAAAGATCATTTTCACCTAATAAATATTCAATGGAGTTAATGGATCCTAGTGCACCTCATGGCCTAAAGCTAACAATTAAAGATTACCCTTTTGCTAGTGATGGTCTCCTCATATGGGATGCCTTGAAAGAGTGGATCACAGACTATGTCAACCATTACTATGCAACTCCAAGCATCATAGAATCAGATCATGAGCTCCAAGCATGGTGGAAAGAAATTAGAACAGTTGGTCATGGAGACAAATCTGAAGAACCATGGTGGCCAAATCTTAAAACACCAAAAGACCTTATTGACATCATCACCACCATAGCTTGGATAGCATCTGCTCATCATGCAGCTGTGAACTTTGGGCAATACACTTATGGAGGCTACTTTCCCAATAGACCTAATATTGTTAGAACCAAAATGCCTACAGAAGACCCTTCTAAGGAAGAGTGGGAAACTTTCGTAAACAAACCTGAGCAAACTCTTTTGGAGTCTTTCGCATCACAAATCCAAGCAACTACCATGATGGTAGTTTATAACGTATTATCATATCATTCCCCAGATGAAGAGTATATTGGACAATACTTGAAGCCATCATGGGCTGAGGATCAAACTATAAAGGTAGCTTTTGAAAAGTTCAATAGCAAACTGAAGGAAATTGAAGGTGTTATAGACTCAAGGAATGCAGATAGTAATTTGAAAAATAGACATGGTGTTGGAGTGGTGCCTTATGAACAAATGAAACCATTTTCTGGACCTGGAATCACTGGCAAAGGAATTCCATACAGCGTGTCTATTTAA 2478 0.4011 HYYVGDTTISTKISNTIISYLITNMCTNPSLTVQFPLCVCTRNTTLAIATRKNNNNNNSWFLSQQHKLFLPSSRVHREVRIGSVSWRVEAVMMRKSGTKNTTKGQNVKAIVTVKGSGGGLLNVVRDGVEAIEGLVGRTLVLELVSIELDSKTNSEAKTIKGDAHKSEEKDDEVYYEATFELPSDFGKVGAVLVENELHKEMFLKSIVLDGFPDGPVHLTCESWVEGRRIEAAKRKWEGERKDSDRIYDYDVYNDLGDPDSNPNLKRPILGGSKQYPYPRRCRTGRDHSNSDPMYEKRSSDFYVPRDETFSDIKESQFNKSTISSGLSAISETLDAILTDQNLGFTSFEDIDTIYKEGFHLPPLKDNNGLNFLQRVIPRLIKAVNDTQNLLRDRFFWISDEEFARETLAGVNPYSIQLVKAREWPLRSKLEPQIYGPPESAITKEVIESHIVDYHDILLPYVSKVREVEGTTLYGSRTLFFLTEQGTLKPLSIELTRPPMNGKPQWKQVFTPLRTHAVMEPFVIATNRQLSAMHPIYKLLHPHLRFTMAINAFAREILINADGIIERSFSPNKYSMELMDPSAPHGLKLTIKDYPFASDGLLIWDALKEWITDYVNHYYATPSIIESDHELQAWWKEIRTVGHGDKSEEPWWPNLKTPKDLIDIITTIAWIASAHHAAVNFGQYTYGGYFPNRPNIVRTKMPTEDPSKEEWETFVNKPEQTLLESFASQIQATTMMVVYNVLSYHSPDEEYIGQYLKPSWAEDQTIKVAFEKFNSKLKEIEGVIDSRNADSNLKNRHGVGVVPYEQMKPFSGPGITGKGIPYSVSI 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01581 825 SUPERFAMILY Lipoxigenase 229 825 IPR036226 -
Pste3g01581 825 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 213 825 IPR013819 GO:0016702|GO:0046872
Pste3g01581 825 MobiDBLite consensus disorder prediction 275 297 - -
Pste3g01581 825 Pfam Lipoxygenase 236 511 IPR013819 GO:0016702|GO:0046872
Pste3g01581 825 Pfam Lipoxygenase 512 577 IPR013819 GO:0016702|GO:0046872
Pste3g01581 825 Pfam Lipoxygenase 579 808 IPR013819 GO:0016702|GO:0046872
Pste3g01581 825 Gene3D - 510 823 - -
Pste3g01581 825 PRINTS Plant lipoxygenase signature 422 441 IPR001246 GO:0016491
Pste3g01581 825 PRINTS Plant lipoxygenase signature 208 226 IPR001246 GO:0016491
Pste3g01581 825 ProSiteProfiles PLAT domain profile. 118 238 IPR001024 GO:0005515
Pste3g01581 825 Gene3D - 395 509 - -
Pste3g01581 825 MobiDBLite consensus disorder prediction 279 297 - -
Pste3g01581 825 ProSitePatterns Lipoxygenases iron-binding region signature 2. 532 542 IPR020834 GO:0016702|GO:0046872
Pste3g01581 825 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 106 234 IPR036392 GO:0005515
Pste3g01581 825 Gene3D PLAT/LH2 domain 86 235 - -
Pste3g01581 825 SMART LH2_4 105 233 IPR001024 GO:0005515
Pste3g01581 825 PRINTS Lipoxygenase signature 505 522 IPR013819 GO:0016702|GO:0046872
Pste3g01581 825 PRINTS Lipoxygenase signature 525 545 IPR013819 GO:0016702|GO:0046872
Pste3g01581 825 Gene3D - 236 330 - -
Pste3g01581 825 PANTHER LIPOXYGENASE 104 825 IPR000907 GO:0016702|GO:0034440|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01581 Pste-Chr3 9919345 9929185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01581 181 825 Acyl Lipid Metabolism Gene Families AT3G45140 47.644 0.0 704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01581 3 9919345 9929185 Pste6g01108 6 4579837 4584652 PCT