Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01333 GTAGAAGGATTGCGCAACTAAAATTGATTTGGTTGCCCATTAGTGGTTTAAGTGAGGGATTAGAGTGGAAAAATTAAATAAACAGCAAATATGGTTGTTCAATATCAGTATCATGGGTGGGTGGGCTGCAGCTAGATTCTAGCTTCTAAAGAAGCATTTAAGTTGGGTTGATTGAAGCTTGTGTGTATATATATGTTGCACGACCCATAACTTCACTATCCCCTAATCACTTCCCTCTCTGTTTTGGGTTCTGATCAGTTTAAGCTGAAGAAGGTTTATCAGTGAGTTGACAAGGGTCGAGATGGATATGCAAATGCAAGCAGCAAACGTGAGGGTTGGAGAAGGAGCAACGGCGCCAGATGATGGCGTAGCCAAAGACAGCACTCAGATTGAACTCACCCAAATCCGTCTCCTCAGGGCACTTGTTCAAACACGTGATCCCTCTTCTAAGGAAGAGGATGATTTAATGCTTAGAAGATTCTTGCGTGCTCGTGATTTAGATGTGGAGAAGGCTTCGACAATGTTCCTCAAATACTTGAAATGGAAACACTCATTTGTTCCAAATGGTTCTATATCTGTGTCAGATGTTCCCAACCAACTTGCACATGACAAGGTGTTTGTACAAGGGCACGACAAGATAGGTCGACCTATACTTATTGTCTTCGGTGCAAAACATTTTCAGAGCAAAAATGGTCTGGATGAATTCAAACGGTTTGTAGTCTATGTTCTTGATAAAGTATGTGCAAGTATGCCAGCTGGACAAGAAAAGTTTGTTGGCATAGCAGAACTTAAGGGCTGGGGATACTCAAACAGTGACGTGCGTGGATACATTGGTGCTCTTGCCATTTTGCAGGATTACTACCCCGAAAGACTTGGGAAGTTGTTTATTGTCAATGCACCATACATTTTTATGAAAGTGTGGCAACTCGTTTACCCGTTCATTGACGAAAAAACCAAGAAGAAGGTTGTGCTTCAAATTTAGTTTGTATCTCTATATATGCATCATATACTAGTATGTGTTTGAGATGTTCAAAGAAAATATTAGGAAATTGGATTTCCCTTGCAGATAGTATTTATGGAGAAAAATAAGGTGAAATCAACACTACTAAAAGACATAGACGAAAGTCAGCTCCCAGAGATATTTGGTGGTCCACTACCATTAGTCCCAATACAGCATAGCTAATCAAGTAGCCACTGACAAATAAGAAGCCATCAGCAAAAAATAAATATTGTTCTTTCTAATTTATGGTTTGTATGTCATTTCCTTTTTAACCCAAATAATATACACTATTGTATCATGTATCACTATGCAATACTAGAATTTTTTTTATTTATTTA 1338 0.3864 MDMQMQAANVRVGEGATAPDDGVAKDSTQIELTQIRLLRALVQTRDPSSKEEDDLMLRRFLRARDLDVEKASTMFLKYLKWKHSFVPNGSISVSDVPNQLAHDKVFVQGHDKIGRPILIVFGAKHFQSKNGLDEFKRFVVYVLDKVCASMPAGQEKFVGIAELKGWGYSNSDVRGYIGALAILQDYYPERLGKLFIVNAPYIFMKVWQLVYPFIDEKTKKKVVLQI 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01333 226 Gene3D - 18 225 IPR036865 -
Pste3g01333 226 SMART CRAL_TRIO_N_2 53 78 IPR011074 -
Pste3g01333 226 Pfam CRAL/TRIO domain 102 223 IPR001251 -
Pste3g01333 226 SUPERFAMILY CRAL/TRIO N-terminal domain 25 88 IPR036273 -
Pste3g01333 226 CDD SEC14 100 223 IPR001251 -
Pste3g01333 226 Coils Coil 219 226 - -
Pste3g01333 226 SUPERFAMILY CRAL/TRIO domain 95 224 IPR036865 -
Pste3g01333 226 SMART sec14_4 99 225 IPR001251 -
Pste3g01333 226 PANTHER OS03G0850700 PROTEIN 25 224 - -
Pste3g01333 226 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 93 226 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01333 Pste-Chr3 8313741 8324720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01333 57 222 Acyl Lipid Metabolism Gene Families AT5G47730 28.571 8.27e-15 70.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01333 3 8313741 8324720 Pste3g01333 3 8313741 8324720 ECH
Pste3g01333 3 8313741 8324720 Pste2g00217 2 1196064 1198659 PCT