Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00217 CACCGTTTGTTATCAGTCAGAAATCAGGCATTGCTGTCACTAAGGAAGACTAAAGAGGAAAGACCGGTGCTGTTGTTGAGGCACCGATTCAAAACTATGGATTCCAATTCCGAACAAGAAGCAACAATGCCCCAAGACAGCACCGATGTCGCATTCAAAGACAGCACCGATGCCGAACTCTCCAAAATTCGTCTCATGAGAGCCTTGGTTGAATCCCGAGATCCCACTTCCAAGGAAGTGGATGATTTGATGATTAGAAGATTCTTGCGAGCTCGTAATTTGGATGTGGAGAAGGCTTCGGCAATGTTCCTTAAGTACTTGAAGTGGAAACGTTCCTTTGTTCCAAATGGTTACATCTCACCCTCTGAGATTGCCCAAGATATTGCACAGGACAAGGTGTATGCGCAAGGGGTTGACAAGAAAGGTCGACCTATAACTGTTGCCTTTGCTGCAAAACATTTTCAATGCAAAAATGGTTCCGATGGCTTCAAACGTTATGTAGTCTTTGCTCTTGAGAAGCTTTGTTCAAGGATGCCACCGGGGCAAGAAAAGTTTCTAGCCATTGCAGACATTAAAGGATGGGGATATGCAAACAGTGATTTTCGTGGATACATTAATGCTCTAACCATTTTGCAGGATTGTTACCCTGAAAGATTGGGGAAGATGTTTATTGTACATGCACCTAATATGTTTATGAAAATTTGGAAAATGATTTACCCTTTCATTGATGACAATACCAAGAAAAAGATAGTATTCGTGGAGAACAAAAAGCTGAAATCAACATTGCTAGAAGAGATAGATGAGAGTCAACTCCCAGATATATACGGAGGTCAAATGCCATTAGTTCCTATCCAGGATAGCTGATTAAGTTTATTTAAAGCCTTGTTTGCCAATTTAGTTTCTCCAAATAATTTCTACTTCTGCATCAGGAGTTGAAAGCAGATTGGAGTTCTGTAGTTGGTTAGGCTATTTTAGGTAATTCATATTATCTTGATTATGCTTATATCAGGCTATTTCACTTGAACGTTTTCTTTGTCTCCTATATTTTAAAACATCAAATAATAAATTATCAATTATACCCGAGGAAGAATTTTTTTTTTCAAAAAGTAAAGCATAACATTGTCAATGACAAAATACAT 1139 0.3854 MDSNSEQEATMPQDSTDVAFKDSTDAELSKIRLMRALVESRDPTSKEVDDLMIRRFLRARNLDVEKASAMFLKYLKWKRSFVPNGYISPSEIAQDIAQDKVYAQGVDKKGRPITVAFAAKHFQCKNGSDGFKRYVVFALEKLCSRMPPGQEKFLAIADIKGWGYANSDFRGYINALTILQDCYPERLGKMFIVHAPNMFMKIWKMIYPFIDDNTKKKIVFVENKKLKSTLLEEIDESQLPDIYGGQMPLVPIQDS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00217 255 SMART sec14_4 95 248 IPR001251 -
Pste2g00217 255 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 89 251 IPR001251 -
Pste2g00217 255 Pfam CRAL/TRIO domain 100 245 IPR001251 -
Pste2g00217 255 SUPERFAMILY CRAL/TRIO N-terminal domain 22 86 IPR036273 -
Pste2g00217 255 SMART CRAL_TRIO_N_2 49 74 IPR011074 -
Pste2g00217 255 CDD SEC14 101 246 IPR001251 -
Pste2g00217 255 SUPERFAMILY CRAL/TRIO domain 98 248 IPR036865 -
Pste2g00217 255 Gene3D - 3 254 IPR036865 -
Pste2g00217 255 PANTHER OS03G0850700 PROTEIN 21 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00217 Pste-Chr2 1196064 1198659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00217 55 240 Acyl Lipid Metabolism Gene Families AT5G47730 24.752 5.79e-10 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00217 2 1196064 1198659 Pste2g00217 2 1196064 1198659 ECH
Pste3g01333 3 8313741 8324720 Pste2g00217 2 1196064 1198659 PCT