Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00955 ATGAATCAATTTTCCAATGAAGATGTGGGAATTGTGGGTGTGATGGAGGCTTTGGTGGAGTCTAAAGGAGGACGAGAGGCATCATTGAAGGCTGGCGATGGATGTAATGTGATGTCACTAGTTGAAGTGAGGCTTTGGTGTCCCCTCAGTGTCCATGACAATATATACATGGCTTTGAACCAAACTCAATTGTTGTCTAAGATGGTCATCGGGGATGGACATGGTGAATCATCCCCATACTTTGATGGATGGAAGGCTTATGATGAAAACCCCTTTCACCCCACTCACAATCCTAATGGGGTTATCCAAATGGGTCTTGCTGAGAATCAGCTTACTTCTGATTTGGTTGAAGATTGGATACTGAGAAATCCAGAGGCCTCCATTTGCACTCCAGAAGGAATATATGATTTCAGGGCCATAGCTAACTTTCAGGATTATCATGGTCTACCCGAGTTCAGAAATGCTGTGGCTAAATTCATGGCTAGAACAAGAGGAAACAGAGTCACATTTGATCCTGACCGTATTGTTATGAGCGGTGGAGCAACTGGTGCACACGAAGTTACTACCTTTTGTTTGGCAGACCCCGGCGACGCATTTTTGGTGCCTATTCCTTATTACCCAGGTTTTGATCGGGATTTGAGGTGGAGAACAGGAGTTCAACTCATTCCAGTTATGTGCGATAGCTCAAATAATTTCAAGTTGACAAAGCAAGCATTGGAGGAGGCCTACAAGAAAGGCAAAGAGGATAACACCAGAGTAAAGGGTTTACTGATCACCAATCCATCAAACCCATTGGGCACAGTCATGGACAGAAACACACTAAGAATGGTAGTGAGCTTCATCAATGAAAAGCGTATCCACCTTGTATGTGATGAAATATATGCTGCAACAGTTTTTAGCCACCCCGGTTTCATAAGCATAGCTGAGATTCTAGAGGAAGACACAGACATTGAAGGTGACCGCAACCTCGTTCACATTGTTTATAGTCTTTCAAAGGATATGGGGTTCCCTGGCTTTAGAGTGGGCATCATATACTCTTACAATGATGCCGTGGTCCATTGTGCACGCAAAATGTCGAGCTTTGGATTAGTGTCAACACAGACTCAGCATCTTTTGGCATCAATGCTGAATGATGATGAGTTTGTGGAGAGGTTTCTGGCAGAGAGTGCGAAAAGGGTGGGACAAAGGTTCAGAGTTTTCACTGGGGGGTTGGCCAAACTTGGCATAAAGTGTTTGCAAAGCAATGCTGGTCTCTTTGTGTGGATGGATTTAAGGCACCTTGTGAAGAAGCCAACGTTGGAGTCTGAAATGGAGCTTTGGAAAGTGATCATTCATGAAGTTAAGATCAATGTTTCACCTGGCTCCTCTTTCCATTGCACCGAGCCAGGGTGGTTTAGGGTGTGCTATGCCAACATGGATGATATGGCTGTGCAAATTGCTTTGCAAAGAATTCGCACCTTTGTGGTTCAAAACAAGGACGTCATGGTGCCTAACAAGAAACATTGTTGGCACAGTAACTTGAGGCTGAGCCTCAAAACCAGAAGGTTTGATGAAGTCATGATGTCACCTCACTCCCCCATACCTCAGTCACCTCTAGTTAAAGCTACAATTTGACTTGCCCTATGTCTCCGCACCCTTTAGAATATGTAACTGATATGAAGATTATTTGGTTCTTTCATTTGTTATTTTGTCCACCTACATACATAAGTGCTGGATTTGTTCTTTTTAACAACAATAACAGGCAATTCCTGACATCTCTGCCTTGCGTCATACAACTTGCTGTGCAGGATGCATTCTTCTGTGAGGGCATTTTTTTTTTTTCTTTTTTCACTTACCAAGGGTTATGGTGAAAGAAGTTTGTAGTAAGATTATTGGTTTATTACAAGAGTCCAGAAGAAGTCTGTATTCTGTTATTGCGATTGTAAGGTCAATAATGAATAAATTGTCAATAAAGGGTTTTCAATATCCACCCTCTTTTCTTTTTCA 1986 0.4255 MNQFSNEDVGIVGVMEALVESKGGREASLKAGDGCNVMSLVEVRLWCPLSVHDNIYMALNQTQLLSKMVIGDGHGESSPYFDGWKAYDENPFHPTHNPNGVIQMGLAENQLTSDLVEDWILRNPEASICTPEGIYDFRAIANFQDYHGLPEFRNAVAKFMARTRGNRVTFDPDRIVMSGGATGAHEVTTFCLADPGDAFLVPIPYYPGFDRDLRWRTGVQLIPVMCDSSNNFKLTKQALEEAYKKGKEDNTRVKGLLITNPSNPLGTVMDRNTLRMVVSFINEKRIHLVCDEIYAATVFSHPGFISIAEILEEDTDIEGDRNLVHIVYSLSKDMGFPGFRVGIIYSYNDAVVHCARKMSSFGLVSTQTQHLLASMLNDDEFVERFLAESAKRVGQRFRVFTGGLAKLGIKCLQSNAGLFVWMDLRHLVKKPTLESEMELWKVIIHEVKINVSPGSSFHCTEPGWFRVCYANMDDMAVQIALQRIRTFVVQNKDVMVPNKKHCWHSNLRLSLKTRRFDEVMMSPHSPIPQSPLVKATI 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00955 537 SUPERFAMILY PLP-dependent transferases 75 488 IPR015424 -
Pste3g00955 537 Gene3D - 124 378 IPR015421 GO:0003824
Pste3g00955 537 Pfam Aminotransferase class I and II 102 484 IPR004839 GO:0009058|GO:0030170
Pste3g00955 537 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 329 342 IPR004838 GO:0003824|GO:0009058|GO:0030170
Pste3g00955 537 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 65 486 - -
Pste3g00955 537 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 323 347 - -
Pste3g00955 537 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 104 130 - -
Pste3g00955 537 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 137 153 - -
Pste3g00955 537 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 196 217 - -
Pste3g00955 537 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 286 309 - -
Pste3g00955 537 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 250 274 - -
Pste3g00955 537 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 174 194 - -
Pste3g00955 537 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 355 378 - -
Pste3g00955 537 Gene3D Aspartate Aminotransferase, domain 1 90 483 IPR015422 GO:0003824
Pste3g00955 537 CDD AAT_like 142 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00955 Pste-Chr3 6034050 6042958 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02090 1 6564007 6566473 Pste3g00955 3 6034050 6042958 PCT