Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02090 TCAGAATCAAGTTAGCAAAACAACTAATTTTGTGTACAAGTGAGTACACGTATAGACTGACCCTATATGGAGCTAATGAGCGTGAACCAACACCAATTACTGTCTAAGATTGCCACTGGTGATGGACATGGTGAAAACTCCCCATACTTTGATGGGTGGAAGGCTTATGAAAATGACCCTTTTCATCCCACCAAAAATCCTAACGGGGTTATCCAAATGGGTCTCGCAGAAAATCAGCTTGCTTCTGACTTGGTTCAGCATTGGTTAACCAATAATCCAGGTGCTTCCATTTGCACTCCAGAAGGAGTGCGTGCATTCAAGGCCATAGCTAACTTTCAGGATTATCATGGTCTGCCGGAGTTTAGAAAAGCTGTTGCTAAATTCATGGCAAGAACGAGAGGAAATAGAGTAACCTTCGACCCTGACCGTATTGTTATGAGCGGTGGCGCAACCGGAGCACACGAGGTCACTGCCTTCTGTTTGGCAGACCCCGGCGACGCATTTTTGGTCCCCACACCTTATTATGCAGGATTCGACAGGGATTTGAGGTGGAGAACAGGAGTTGAACTTGTTCCAGTTATCTGTGAAAGTGGTAATGATTTCAAGTTAACAAGAAAAGCGTTGGAAGAGGCATTCGAGAAAGCTGAAAAAGACAAGATAAAAATAAAAGGATTGCTGATTACAAATCCATCGAACCCACTAGGGACAATGATGGACCGAGAAACATTAAGAATAGTGGTGAGTTTCATTAATGAAAAACAAATCCACCTAGTAAGCGACGAAATATATGCTGGTACAGTGTTTGGGGAGCCTGGTTTCACGAGCATAGCGGAGATAATAGAGCAAGAGAGAGACATAGAATGTGACCGTGACCTTATCCACATTGTTTATAGCCTTTCAAAGGACATGGGGTTCCCTGGTTTCAGAGTTGGCATCATATACTCTTACAACGACGCGGTGGTGAATTGCGCTCGTAAAATGTCGAGCTTCGGGTTAGTGTCGACACAGACACAATACCTTATAGCATCGATGCTTTCTGATGATGAGTTTGTGGAAGGGTATCTCGAAGGGAGTGCAAAAAGGCTTGGGAAAAGGTACGAGGTATTCTGCAGGGGGCTGGCCCAAGTAGGCATAAAGTGTTTGGCGAGCAACGCTGGTCTGTTTCTGTGGATGGATTTGCGTCGGCTTTTGAAGAATGCAACGTTTGAAGCGGAAATGGAGCTGTGGAGACTCATAATTCAGCAGGTTAAGATCAACATTTCCCCTGGCTCTTCCTTTCATTGTTCTGAGCCAGGGTGGTTCAGAGTCTGCTATGCAAACATGGATGATAGAACCGTGGAAGTTTCTTTGGCTAGAATGCACAACTTCGTGCATCAGAACACCCAAACCAAGAAATCATGCAACTATAGAAACTTAAGGCTAAGCTTCTCATCCAGAAGGTTGGATGATTTCATGCTTTCACCACACTCACCTTTTCCTCAATCACCTCTAGTTAAAGCCTCCACTTGA 1509 0.4447 MELMSVNQHQLLSKIATGDGHGENSPYFDGWKAYENDPFHPTKNPNGVIQMGLAENQLASDLVQHWLTNNPGASICTPEGVRAFKAIANFQDYHGLPEFRKAVAKFMARTRGNRVTFDPDRIVMSGGATGAHEVTAFCLADPGDAFLVPTPYYAGFDRDLRWRTGVELVPVICESGNDFKLTRKALEEAFEKAEKDKIKIKGLLITNPSNPLGTMMDRETLRIVVSFINEKQIHLVSDEIYAGTVFGEPGFTSIAEIIEQERDIECDRDLIHIVYSLSKDMGFPGFRVGIIYSYNDAVVNCARKMSSFGLVSTQTQYLIASMLSDDEFVEGYLEGSAKRLGKRYEVFCRGLAQVGIKCLASNAGLFLWMDLRRLLKNATFEAEMELWRLIIQQVKINISPGSSFHCSEPGWFRVCYANMDDRTVEVSLARMHNFVHQNTQTKKSCNYRNLRLSFSSRRLDDFMLSPHSPFPQSPLVKAST 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02090 480 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 276 289 IPR004838 GO:0003824|GO:0009058|GO:0030170
Pste1g02090 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 143 164 - -
Pste1g02090 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 302 325 - -
Pste1g02090 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 84 100 - -
Pste1g02090 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 51 77 - -
Pste1g02090 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 270 294 - -
Pste1g02090 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 197 221 - -
Pste1g02090 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 233 256 - -
Pste1g02090 480 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 121 141 - -
Pste1g02090 480 SUPERFAMILY PLP-dependent transferases 21 435 IPR015424 -
Pste1g02090 480 CDD AAT_like 89 432 - -
Pste1g02090 480 Gene3D Aspartate Aminotransferase, domain 1 37 430 IPR015422 GO:0003824
Pste1g02090 480 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 9 435 - -
Pste1g02090 480 Pfam Aminotransferase class I and II 49 428 IPR004839 GO:0009058|GO:0030170
Pste1g02090 480 Gene3D - 71 325 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02090 Pste-Chr1 6564007 6566473 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02090 1 6564007 6566473 Pste1g02090 1 6564007 6566473 ECH
Pste1g02090 1 6564007 6566473 Pste3g00955 3 6034050 6042958 PCT