Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00832 AAGAGAAGAGAAGAGAAGAGAAGAGAGAAGTAGGAAAAAGAGAGAGATGGCAGAAAAGAGGTTCATCGTAGAGGTGGAGAAAGGAAGAGAGGGCAGCGAAGGAAGGCCATCAATGGGTCCCGTCTATCGTAGCCTTTTCGCCACCGATCCATTTCCTCCTCCCATTGAAGTTGGAAACTCCATTCGTTCGTGTGGCTACACGGAGGGTGTAAAATGTGGTATTTATGGTGCCAATTGCCCAGAATGGATTATAAGCATGGAGGCTTGCAATGCTCATGGACTTTATTGTGTTCCCTTATATGATACTTTAGGTGCTGGGGCTGTGGAGTTTATTATATGTCATGCAGAGGTCTCAATTGCATTTGTTGAAGAGAAAAAGATACCCGAGCTATTAAAGACATTTCCAAACGCAGCAAAATTTCTCAAGACACTTGTAAGTTTTGGAAAGGTTACTTCTGAACAAAAGCAAGAACTTGAAAAGTTTGGGTTGACAATATATTCATGGGATGAATTTTTGCAAGAGGGTCATGATCAAAGCTTTGATCTTCCTATGAAAAAGAAAAGTGATGTGTGTACAATAATGTATACAAGTGGAACTACTGGTGATCCCAAGGGAGTATTGATATCCAATGAGAGCATTATTACACTTTTAGCTGGGATTCAACAAGTATTGAGGAGTTGTAATGAAAAATTGCATGAAAAAGATGTATACCTATCATACCTTCCTCTTGCACATATCTTTGATAGGGTCATTGAGGAGGCAATGATAATGCATGGTGCCTCAATAGGTTTTTGGCGTGGAGATGTGAGAGTGTTACTAGAAGATATTGGAGAGCTACAGCCAACCATTTTTGTTGCAGTTCCCCGCGTGCTTGATAGAGTTAAGTTGCATAACATGATTAAAGGCCAAAATCATAATGAAGCATCTCCACTATTTGACAGAGTTGTATTTAGTAAGGTAAAGCAAAGCTTAGGGGGTAATGTACGTATTATTTTGTCTGGAGCAGCACCTTTATCTAAACACGTGGAAGGTTTCTTGCGGGTGGTGACTTGTGCTCATATACTACAAGGATATGGTCTGACTGAAACTTGTGCTGGAACCTTTGTCTCATTACCAAATGAAAAGAATATGCTTGGTACGGTGGGACCTCCTGTACCGTATGTGGATGTGTGCTTGGAATCTATTCCTGAAATGGGATATGATGCACTTGCTAGCACACCAAGGGGAGAAATTTGTGTCAGGGGAAATACTGTGTTTTCAGGATATTACAAACGTGAAGACCTCACCAAAGAAGTTATGGTTGATGGCTGGTTCCACACAGGGGATGTTGGAGAGTGGCAACCAAATGGAGCAATGAAAATTATTGATCGGAAGAAGAATATATTTAAGCTTTCACAAGGAGAATATGTTGCTGTTGAAAACCTGGAGAATATTTATGTCCAAGCTTCTGTTGTTGAATCTATATGGATTTATGGAAACAGTTTTGAGTCATACCTTGTTGCTATTATTAACCCTAAGAAGCAGGCACTTGAGCAATGGGCGGAAGAAAATGATATAACCAAAGACTTTGATTCTCTTTGTGAAGATTCTAAGACAAAAAGTTTTGAGTTTATTAAAGCTATTCATCTTGACCCCGTGCCGTTCGATATTGAACGTGGTCTTATGACTCCAACATTTAAGATGAAGAGACCTGAATTGCTTAAATATTAC 1711 0.398 MAEKRFIVEVEKGREGSEGRPSMGPVYRSLFATDPFPPPIEVGNSIRSCGYTEGVKCGIYGANCPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIICHAEVSIAFVEEKKIPELLKTFPNAAKFLKTLVSFGKVTSEQKQELEKFGLTIYSWDEFLQEGHDQSFDLPMKKKSDVCTIMYTSGTTGDPKGVLISNESIITLLAGIQQVLRSCNEKLHEKDVYLSYLPLAHIFDRVIEEAMIMHGASIGFWRGDVRVLLEDIGELQPTIFVAVPRVLDRVKLHNMIKGQNHNEASPLFDRVVFSKVKQSLGGNVRIILSGAAPLSKHVEGFLRVVTCAHILQGYGLTETCAGTFVSLPNEKNMLGTVGPPVPYVDVCLESIPEMGYDALASTPRGEICVRGNTVFSGYYKREDLTKEVMVDGWFHTGDVGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENIYVQASVVESIWIYGNSFESYLVAIINPKKQALEQWAEENDITKDFDSLCEDSKTKSFEFIKAIHLDPVPFDIERGLMTPTFKMKRPELLKYY 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00832 555 ProSitePatterns Putative AMP-binding domain signature. 178 189 IPR020845 -
Pste3g00832 555 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 41 555 - -
Pste3g00832 555 FunFam Fatty acyl CoA synthetase 2 37 442 - -
Pste3g00832 555 SUPERFAMILY Acetyl-CoA synthetase-like 43 555 - -
Pste3g00832 555 Gene3D - 41 440 IPR042099 -
Pste3g00832 555 Pfam AMP-binding enzyme 42 450 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00832 Pste-Chr3 5122497 5135595 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00832 3 555 Acyl Lipid Metabolism Gene Families AT4G23850 63.665 0.0 840
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01876 1 5787339 5797984 Pste3g00832 3 5122497 5135595 PCT