Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01876 CACGGAAAATGATTTGACAAAGAGAAAATATATTGTCTTTAAAAGAAAAAACTGAAAGCATCTCGAAAAGAAAGGCATGCAGGGAATTAATGAGAATTGGTTCGGAAATTGTTGACCTGCTCAAACCTAATTCGTTTAAAAGTCTCTACGGAAGCAAATAGCAAAGTAACGCCACGCCAAACGCAAGAGGCAAATCCAATAGCAAAGTAACGACACACCATTCTCTCTTGGGGGCAAGTCAAAACCGTCATTCGCACACTTCACCAAACTTGGGAATAAAAATTATCTTCCACTTTCCATTCCATTCCTGGATTGGAGCGAAAGAGGAATAGTGGCAGCGATGGCACAGAAGAGATTCATCATAGAGGTCGAGAAAGCGAAGGAAGCGAGCGAAGGAAGACCATCGAGAGGACCTGTCTATCGAAGCCTCTTCGCCAAGGATGGATTCCCCGCTCCTATCCAAGGCCTCGATAGCTGCTGGGACGTTTTTCGAATGTCTGTTGAGAAATTTCCAACAAATCCAATGCTTGGTCGCCGGGAAATTGTGGACGGGAAGCCTGGCAAGTACAAGTGGCTAACATACAAAGAAGTGCATGATTTGGTGATGAAAGGTGTAAAATGTGGTATTTATGGTGCCAATTCTGCAGAATGGATTATGAGCATGGAGGCCTGCAATGCTCATGGACTTTATTGTGTTCCATTATATGATACCTTGGGCGCTGGGGCTGTAGAGTTTATTATATGCCATGCTGAGGTCTCAATTGCCTTTGCTGAAGAAAAGAAGATACCTGAGCTATTGAAGACATTTCCAAATGCAACAAAGTATCTCAGGACAATTGTAAGCTTCGGAAAGGTTACCTCAGAACAAAAGCAAGAAGTTGAAAAGTTTGGATTGGCAATATATTCATGGGATGAATTTTTAGAAGTGGGTCAAAATCAGAGTTTTGATCTTCCTATTAAGAAAAGGAGTGACATCTGTACAATAATGTATACTAGTGGAACTACTGGTGACCCCAAGGGAGTGTTGATATCAAATGAGAGTATTATTACTCTCTTAGCTGGGGTTAAGCGACTGTTGGAGAGTGTCAATGAAAAATTGACTGAGAAGGATATATACATATCATACCTTCCTCTTGCTCATATCTTTGATAGGGTCATAGAGGAGACATTTATATGGCATGGAGCGTCAATAGGTTTCTGGCGTGGGGATGTCAAATTGTTAATTGAAGATATTGGGGAACTAAAACCAACTATTTTCTGTGCTGTTCCTCGTGTGCTTGATAGAGTGTATTCAGCACCTTTATCTGCTCACGTTGAAGGTTATTTACGGGTGGTGACTTGTGCTCATGTCCTACAAGGATATGGTCTGACTGAAACCTGTGCGGGAACCTTTGTCTCATTACCAAATGAAATGGAAATGCTTGGAACAGTGGGTCCTCCTGTTCCAAACGTGGATGTATGCCTCGAATCTGTTCCTGAAATGGGATATGATGCCCTAGCAAGCACACCAAGAGGAGAAATTTGTGTAAAGGGAAAAACCTTGTTTTCAGGGTATTACAAACGGGAAGACCTCACCAAAGAGGTTTTGATTGATGAATGGTTCCATACAGGGGATATTGGAGAATGGCAACCTAATGGAAGCATGAAAATTATTGATCGTAAGAAGAACATATTTAAACTTTCACAAGGAGAATATGTTGCTGTCGAAAACCTGGAGAATATTTATGGTCAAGTTTCTTCTATTGAATCTATATGGGTTTATGGAAACAGTTTTGAAGCCTTCCTTGTTGCTGTTGTTAACCCTAGTAAGCAAGCACTTGAACATTGGGCACAAGAAAATGGTATATCCATGGACTTCGATTCTCTCTGTGAAGATTCTAGAGCAAAAAGTTACATACTTGAAGAGCTCTCAAAGATCGCAAAGGAAAAGAAGTTGAAAGGTTTTGAGTTTATAAAAGGAGTTCACCTTGACCCAGTCCCATTTGACATGGAACGTGACCTTATCACTCCAACATATAAGAAGAAGAGGCCCCAGTTGCTTAAATACTATCAGAGTGCCGTTGACAACATGTACAAGAGTGGAAGTAAACCCAATGCCTGAGACGTGCTTTGGGAGTTAAATGCCTTGGAGAGAGTGTATTTTTTGCATCTGATGGTATTTCTCTCCGTTCATTTGTTTCCCTTTGGTGACTGTATATACGACGATTAGTTATATATCGATACGTCAATAGAACATATTCTTTGTTATTATTTTTAAATCATATTATACTCACATTTCTGTAAATTCTCTTTTAACATGTTTAATGATGAGACGACTTACTGGATTTTCAA 2331 0.4015 MAQKRFIIEVEKAKEASEGRPSRGPVYRSLFAKDGFPAPIQGLDSCWDVFRMSVEKFPTNPMLGRREIVDGKPGKYKWLTYKEVHDLVMKGVKCGIYGANSAEWIMSMEACNAHGLYCVPLYDTLGAGAVEFIICHAEVSIAFAEEKKIPELLKTFPNATKYLRTIVSFGKVTSEQKQEVEKFGLAIYSWDEFLEVGQNQSFDLPIKKRSDICTIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNEKLTEKDIYISYLPLAHIFDRVIEETFIWHGASIGFWRGDVKLLIEDIGELKPTIFCAVPRVLDRVYSAPLSAHVEGYLRVVTCAHVLQGYGLTETCAGTFVSLPNEMEMLGTVGPPVPNVDVCLESVPEMGYDALASTPRGEICVKGKTLFSGYYKREDLTKEVLIDEWFHTGDIGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIYGQVSSIESIWVYGNSFEAFLVAVVNPSKQALEHWAQENGISMDFDSLCEDSRAKSYILEELSKIAKEKKLKGFEFIKGVHLDPVPFDMERDLITPTYKKKRPQLLKYYQSAVDNMYKSGSKPNA 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01876 586 ProSitePatterns Putative AMP-binding domain signature. 215 226 IPR020845 -
Pste1g01876 586 SUPERFAMILY Acetyl-CoA synthetase-like 43 580 - -
Pste1g01876 586 Gene3D - 42 440 IPR042099 -
Pste1g01876 586 Pfam AMP-binding enzyme 74 448 IPR000873 -
Pste1g01876 586 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 318 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01876 Pste-Chr1 5787339 5797984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01876 3 580 Acyl Lipid Metabolism Gene Families AT4G23850 68.502 0.0 919
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01876 1 5787339 5797984 Pste1g01876 1 5787339 5797984 ECH
Pste1g01876 1 5787339 5797984 Pste3g00832 3 5122497 5135595 PCT