Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00797 GAGTGATGAAGGGTTGACGGGAGTTGAAAGGAAAGAAGTTCCCGTTATAGGAGTATAAAATGACAACGGGTAGAATACCGTTAATCTCAATCTCATATGGCACTCCACCATCACTGGTTTATCGGAGCAGAAAAATTCGGCCCCTCACTGGTCTGGACCTGGTAATAACACATTACACATGACATCATTCCTCTCTTTTCGTCGCCTTCTCTTCTCTGCATCCATCCTTTCCTTTTAAGCTCTTCATTCTCTCATTTTTCCCTTTGATTCTTTCCTTTCGGTAAAGAGTCCCCTCTCGCTCGCTCGCTACTCGCTTTCCTTCCACTTTCGAGAGTTATATAATATTGCACCTCCCATTCTGCCTCTTCCAATATTACCTTCTTTCTTTATTATGGATTTCTAACATTTGTTCTACTCGTTTAGGTAACCCCATTTTCATTTCGGAACCCAAACCCAAACCAAAACCAATAAACAATCCAATAAATCCCAACCATGTCTATTGCTGAATTTGCTTTGAGTTCAGTTTTCAAACACAAAATACATTGGGAAGGCCAACCGGCACATTGTTCTGGTGAGCCAATCCTGATTTACCTCATCGTCGATGGCGCTGTCACCCCAATGCGCGTGTTGGAGTCCGATTCCATCGCTTCGGTCAAACTCAGGATTCAGCAGTACAAAGGCTTCGTCGTCAAGAAGCAGAAGCTGGTTTTTGGTGGCAGAGAGCTAGCTCGCAATGGCACTCTCATCAAGGAGTATGGTGTCACTGATGGCAATGTTCTTCACTTGGTTCTTCGCCTCTCCGATCTTCTCTTCGTTGTCGTCAGGACCGTTTCTGGAAAGGAATTTGAGTTCCACATCGATAGGCACCGAAATGTGGGTTATCTTAAGCAACGCATTTTAAATAATGGGGAAGGTTTCGTTGATCTTGAGGATGATCAAGAGCTTTTCTGCAATGATGAGGAGCTCGATGACCAGAGACTCTTCCATGACATCTGCACTAGTGATGATGATGTGATTCATTTGATAGTTAAGAAAACTGCCAAGATTAGAACCACACCGATTCGCAACGATTTGAAGCTCTCGGTGGAGGCACCAGTAAAACACAACAGGGACAGACATGTTGAGATAGAAAAGGGGCCACCTGATGCAGGTTTCTGGTTGGAGCCACTTATTGTGAATCCTGAGATCAATTTTTTCCCTTTCCTTTGGGACATGATCAACTCCACATTTGAAGGTTTGATGAACGGAAAACACCCTATTAGGTCTTCTGAAGGCACTGGAGGGACATACTTCATGCAAGATTCAACAGGTCAGGAGCATGTTTCGGTTTTCAAGCCCATGGACGAGGAACCAATGGCTGTGAACAACCCAAGAGGTCTTCCAAATTCATCCAATGGTGAAGGTTTGAAAAGAGGGACAAAGGTTGGAGAAGGAGCCTTGAGGGAAGTAGCAGCTTATTTATTAGATCATCCAAGGAGTGGACCGCGTTTGGTGTCTCGTGAAGCAGTGGGATTCTCTGGTGTTCCCCCAACTGTTATGGTGCAGTGCTTGCACCAAGAGTTCAACCACCCAAATGGGTATGCTTTCTCCTCAAAACATGTTAAGATTGGGTCACTGCAGAAGTTCATGAGTAATGACGGTAATTGTGAGGACTTTGGACCCCAGGCTTTCCCGGTGGAGGAGGTGCATAAGATTACTGTGCTTGATATAAGATTGGCTAATGCAGATAGGCATGCTGGGAACATATTGATCAGAAAGGAGGCAGATGGTCTGATGAAGCTCATTCCTATTGATCATGGCTATTGTCTACCTGATAAATTTGAAGATTGTACATTTGATTGGCTTTACTGGCCACAAGCACGTCAACCTTACTCTCCTGAGACAGTCGATTATATCAATTCTCTGGATGCTGAAAAAGACTTGGAACTTTTGAAATGTTACGGATGGAATATTCCACTCCAGTGTGCTAGAACACTTAGTATTTCCACAATGTTGTTGAAGAAAGGGGCTGAGAGAGGTCTTACTCCCTATGATATTGGAAGCATTATGTGTCGGGAAAATTTGAACAAGGAATCTTTGATTGAAGAAATTATTGGGGAAGCCCAAGATTCCTTGCTTCCTGGCATGGAGGAATCAACATTTCTTGAAGCCATCTCCCAAATCATGGATTACCGCCTTAATAAGCTTGCAAAATAGGCTCTTTTTTTGTTTTTTTCAGAGTCATAGGTGTATTTGTATATATTAAGTGAGTGAATTAGTCCATTTTTGGATGGACTGCAGGTTGCATAAATTGTTGTATGTTATATGGCTTGATGTGTTCTGGACATAGGCCTGATGATGCTCTTATGTATTTCTAGCTTCTCTGAACTGTTTTTCAGGATTGTATTGCCATGTTGAACAGAAATCAAAGTCTGAACAAGATGTATTATACTGAGTGAGGTTTCATCTATTATAGTATAGGATTGTACCAGGCGTGACAAAGGAGCTGGATCTGTCACGTGTATATAATAAATGTAACATGCTAGGTTTCAACACCGAATAAATGTAATATGTTATGGGCTTATGAAATGGA 2572 0.425 MSIAEFALSSVFKHKIHWEGQPAHCSGEPILIYLIVDGAVTPMRVLESDSIASVKLRIQQYKGFVVKKQKLVFGGRELARNGTLIKEYGVTDGNVLHLVLRLSDLLFVVVRTVSGKEFEFHIDRHRNVGYLKQRILNNGEGFVDLEDDQELFCNDEELDDQRLFHDICTSDDDVIHLIVKKTAKIRTTPIRNDLKLSVEAPVKHNRDRHVEIEKGPPDAGFWLEPLIVNPEINFFPFLWDMINSTFEGLMNGKHPIRSSEGTGGTYFMQDSTGQEHVSVFKPMDEEPMAVNNPRGLPNSSNGEGLKRGTKVGEGALREVAAYLLDHPRSGPRLVSREAVGFSGVPPTVMVQCLHQEFNHPNGYAFSSKHVKIGSLQKFMSNDGNCEDFGPQAFPVEEVHKITVLDIRLANADRHAGNILIRKEADGLMKLIPIDHGYCLPDKFEDCTFDWLYWPQARQPYSPETVDYINSLDAEKDLELLKCYGWNIPLQCARTLSISTMLLKKGAERGLTPYDIGSIMCRENLNKESLIEEIIGEAQDSLLPGMEESTFLEAISQIMDYRLNKLAK 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00797 567 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 40 540 IPR044571 -
Pste3g00797 567 FunFam Phosphatidylinositol 4-kinase gamma 4 27 106 - -
Pste3g00797 567 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 252 549 IPR000403 -
Pste3g00797 567 SUPERFAMILY Ubiquitin-like 102 180 IPR029071 -
Pste3g00797 567 SUPERFAMILY Protein kinase-like (PK-like) 408 565 IPR011009 -
Pste3g00797 567 Pfam Phosphatidylinositol 3- and 4-kinase 261 514 IPR000403 -
Pste3g00797 567 ProSiteProfiles Ubiquitin domain profile. 32 101 IPR000626 GO:0005515
Pste3g00797 567 MobiDBLite consensus disorder prediction 286 306 - -
Pste3g00797 567 SMART ubq_7 30 101 IPR000626 GO:0005515
Pste3g00797 567 SMART ubq_7 106 180 IPR000626 GO:0005515
Pste3g00797 567 Gene3D - 106 181 - -
Pste3g00797 567 ProSiteProfiles Ubiquitin domain profile. 106 184 IPR000626 GO:0005515
Pste3g00797 567 CDD Ubl_ubiquitin_like 108 178 - -
Pste3g00797 567 Pfam Ubiquitin family 37 102 IPR000626 GO:0005515
Pste3g00797 567 Gene3D - 34 104 - -
Pste3g00797 567 SUPERFAMILY Ubiquitin-like 35 103 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00797 Pste-Chr3 4941211 4943968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00797 1 566 Acyl Lipid Metabolism Gene Families AT5G24240 56.870 0.0 669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01824 1 5599573 5601650 Pste3g00797 3 4941211 4943968 PCT