Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03369 AAAAATAGCAAAAGGAGGTTTGTGGAATTAGCGCTTTTCTTTTTTATCCATCCGCAGAGAGATTAAACGCACGCAGCTTTTGTTTCTCTCTTTCCTTCTCTATTTTTGATTTAAATTTACAAAGTAAAAAAAATAAAAAATCCTCTGCTTCTTTCTTCTCTGCACTTTTACGTTACACCCAAAACTCAAACCCATCGACATCTTTCTCTTTCTCTCTCTACATGCGATCAATTTAGGGTTTTGGAACAGTGAATCTTCACCACCTCAGTTGAAGTTCCTATTAAGTGTGATGTCATTCATTTAAGGAACGTGTCGTGGTCATGGTTGTTATGTTATTTGGTTCCTACCAACAATGCTCTTGGGAATTCATGTGAATGGTTCGAGTGACAATGTGATATTTGTAATTTTCATTACAAAAAGAGATATATAATCTTTCAGTAGTATGGCAACTGAGAGTCCAATTAGAATCTCAGAAGCTGGGGGTAAATGGCCCTCTCATAAGGAGGCTACAGCTTTTGGTTCATCGTCTCGTAACATGGCTACAGAGGATTTGGGTATACTTCTCAAGGGCCATAGGTTCCATGGTGGTGGAAAGGATGTCACACCCAATCGTAGTGGCAGTGCACCTCCAAGCATGGAAGGCTCATTTCTGGCCATAGAAAACCTCTTAACCCCGCAGAACACCACCCAGAATGCAAGCTTTACAAGTCTAAGTGGTGCTAGGCAAAATTGCGGGTCTGAAGAACAATTGCGATCTGATCCAGCTTATTTGGCATATTATAGTTCCAATGTTAACATGAACCCTAGACTTCCTCCCCCTCTTACGTCCTGGGAAAATCGCCATCTAGGACGTCATATTGGCAGTTTTAGAAATAATTGGAGAATGTCTACTGCAGATGATAATGGTAAAAGTTCTTTACATCTGCCTCAAAGGACTCTGTCCACACATAAGGAGGAGTCGGAAGATGATTCACCCCAGCAGCCATATAACGATGAATTAGTTAAGGCAACTGGAACATGGTGTGGACCTGATGCAGCTCTATTGGCATCTCAGCACAAAAATCTGGTTGATTTAATTCAGGAAGATTTTCCTCGTACAATGTCACCTGTATATAATAAGTCTCTTTCTGTAAGTCACGGACTAGTGGATAAACCAATTGACATAGAATTCGGTTCTAGTTCTTCTCATGATCCCCCTATTACTGCAGTAGAGGCAGCTAAGCCTACTGTAGGTGCAGATGATATAAGGGTGTCATCAAGTCTTGATACCCATGCCCCAGTTGCAAGCTCATCATCTATTGAATCCACTGACAGCATTGGTGTAGGTGACTTAGACGTCGCCTCTGTTGAGTCTCAACTAAAGGCTCTTGTTGTATCTAACATACCAAATTCAGAAAGTCTGAGCTATGAAGAAAAATGGAAGACCAGCTACCAGAACAATTTGATGCAACGCCAGGGATTCCAGCAACAAAACAATCCATGTGATTTTCCCAGTGCCAATTCTCAAAATGTAAATTCTGTGTATGCTGGTAGGGAACAGTTTCCTTTTAATCCCAACAAGTTCTCCAATGTCCAGCCATTACTGCAGTCATCTGGGTTTACTCCTCCCCTATATGCCACTGCAGCTGCTTATATGTCAGCCAATCCATTTTATACTAATATGCAGGCATCAGGTATATATACTCCACAATATGTTGGTGGATACACTGTAAATCCCACAGCTTTTCCTCCATATGTTACTGCATACGCTCCTCATGGTGCTGTACCACTTGTTGATGGAGCCACTAGTTCTAGTTATACTCCACTAACATCAGGGGTTTCAACTGGGGGAAACATTTCACATGGAACTGAAATGGTACAGACTAACAAGTATCTTGGACAATTTGGATTTCCTTTGCAGCCTTCTTTTGGTGATCCTGTGTACATGCAATATCATCAGCAACCTTATGTGGAGGGATATGGGATTTCTGGTCATTTTGATCCAATGGCACCTAGAGCTAGTGGTATTAGCCCAATTAGTCCTTATGATTCACAAAAACGGCCCAGTACTGGTGCTTATTTGGATGATAAAAAATTACCTGATCAGAGACCTGGTGCTAATATGACCTCAAGAAGAGGTGGGTTGTTGATTCCTAGTTATTTTGGACAAATGCCAAACATGGGTTTTGTAATGCAGTATCCAAGTTCACCACTTCCTAGTCCAGTTTTGTCAGGATACTCTGAAGGAAGTTCTGGCCTTCCAGGAGTTAGGAGTGAATTAAAACTTTCCCCAGCTTCTGGAAGAAATGGAGGCATAATGCCTGGATGGCAAGGTCAGAGATCGTTTGACAGTGCTCATGACCCCAAAATTATTAATTTTCTTGAAGATTTAAAATCTGGCAAAGGACGAAGATTTGAGCTATCTGATATTATTGGACATATTGTTGAATTTAGCTCTGATCAGCATGGAAGTCGATTTATACAGCAGAAGTTGGAAAGTTGTAGTGTTGAAGAGAAGGCATTGGTGTTTAAAGAGGTTCTTCCACATGCTTCTAAATTAATGACTGATGTATTTGGTAACTACGTAATACAGAAGTTTTTTGAGTATGGAAGCCCTGAACAGAGGAGAGAACTTGCGGATCGACTGGTTGGCCAGATACTGCCTTTAAGTCTTCAGATGTATGGCTGTCGTGTAATCCAAAAGGCACTTGAGGTTATTGAGCTTGAACAGAAAGCTCAGCTTGTTCTTGAGCTAGATGGAAATGTTATGAGATGTGTTCGCGACCAAAATGGTAACCATGTAATTCAAAAGTGCATTGAATCGATTCCAACCAAGAAAATTAGTTTTATACTATCTTCGTTTCGTGGTCAAGTTTCTATTCTATCAATGCATCCCTATGGATGCCGAGTCATACAGAGAGTTCTAGAACATTGCACAGATGAGAGTCAATGTCAGTTTATTGTGGATGAAATCTTGGAGTCAGTTTGTGCTCTTGCTCAGGACCAGTATGGTAACTATGTTACACAGCATGTCTTGGAGAGAGGGAAGCCTCAAGAAAGGAGTCAAATTATCAGCAAGTTGTCAGGACACATTGTTCAATTAAGCCAGCATAAGTTTGCTTCAAATGTTGTAGAAAAATGTTTGGAGTATGGTGATGCCACAGAACGGGAATTGCTAATTGCAGAGATATTTGGGCATGATGAACAAAGTGATAATTTATTGACAATGATGAAAGATCAATTTGCGAATTATGTGATTCAGAAGGTCATTGATATCTGTTCTGAAAATCAGCGAGTAGTGTTGCTTTCTCATGTACGAATTCATGCTCATGCCTTGAAGAAATACACATATGGAAAACACATTGTGGCTCGAGAATCAAACATCCAGCTCTTGATTAGAACAGAGTCGAAGCCATGGGTCTCCAGCAATGCTGCTGTGGTGTCCATACCATACCCCGCAGCTTCAACATAGATGTTGATCACAATTGATAGCAACCTGTTGGTTTTTACTCCTGACTTCATAACTGCGCCGTGATAGCTTCCTCATTGATGGCTTCAGGAAACATTAGTATATACAACTATACTTTGAAACTCAATGTAATTATGTCATTCAAATAATTGGTTCGAAATGTTATTTGAATATAATTATTTGGAAGGAAACCCTTCCCTTCCTGATGTATAAGTTACTGGGTCTTCTGTGCTTAGTGTGTGGTTTTCTTGGAGATAAGGTATTCAAGAATTCTTAAACTCAACTAGTCCTTATCACCTTAGCACTTGATCCTTGTGATGCATGTTTTAATGGAGAATGATTAAATTTAATGATTGTTTTTGTTAAATCACTTTAATTGTAGGAAATGCTTTTCTGATGTCAGATATTGACCAATACGTAAAGACAAAAATTGGTGCAGGAAACAATTTGTATCGTGTATAGGCAG 3914 0.3993 MATESPIRISEAGGKWPSHKEATAFGSSSRNMATEDLGILLKGHRFHGGGKDVTPNRSGSAPPSMEGSFLAIENLLTPQNTTQNASFTSLSGARQNCGSEEQLRSDPAYLAYYSSNVNMNPRLPPPLTSWENRHLGRHIGSFRNNWRMSTADDNGKSSLHLPQRTLSTHKEESEDDSPQQPYNDELVKATGTWCGPDAALLASQHKNLVDLIQEDFPRTMSPVYNKSLSVSHGLVDKPIDIEFGSSSSHDPPITAVEAAKPTVGADDIRVSSSLDTHAPVASSSSIESTDSIGVGDLDVASVESQLKALVVSNIPNSESLSYEEKWKTSYQNNLMQRQGFQQQNNPCDFPSANSQNVNSVYAGREQFPFNPNKFSNVQPLLQSSGFTPPLYATAAAYMSANPFYTNMQASGIYTPQYVGGYTVNPTAFPPYVTAYAPHGAVPLVDGATSSSYTPLTSGVSTGGNISHGTEMVQTNKYLGQFGFPLQPSFGDPVYMQYHQQPYVEGYGISGHFDPMAPRASGISPISPYDSQKRPSTGAYLDDKKLPDQRPGANMTSRRGGLLIPSYFGQMPNMGFVMQYPSSPLPSPVLSGYSEGSSGLPGVRSELKLSPASGRNGGIMPGWQGQRSFDSAHDPKIINFLEDLKSGKGRRFELSDIIGHIVEFSSDQHGSRFIQQKLESCSVEEKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGSPEQRRELADRLVGQILPLSLQMYGCRVIQKALEVIELEQKAQLVLELDGNVMRCVRDQNGNHVIQKCIESIPTKKISFILSSFRGQVSILSMHPYGCRVIQRVLEHCTDESQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIISKLSGHIVQLSQHKFASNVVEKCLEYGDATERELLIAEIFGHDEQSDNLLTMMKDQFANYVIQKVIDICSENQRVVLLSHVRIHAHALKKYTYGKHIVARESNIQLLIRTESKPWVSSNAAVVSIPYPAAST 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03369 1002 ProSiteProfiles Pumilio RNA-binding repeat profile. 872 907 IPR001313 GO:0003723
Pste2g03369 1002 ProSiteProfiles Pumilio RNA-binding repeat profile. 836 871 IPR001313 GO:0003723
Pste2g03369 1002 SUPERFAMILY ARM repeat 640 970 IPR016024 -
Pste2g03369 1002 MobiDBLite consensus disorder prediction 1 29 - -
Pste2g03369 1002 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 635 975 IPR033133 GO:0003723
Pste2g03369 1002 ProSiteProfiles Pumilio RNA-binding repeat profile. 799 835 IPR001313 GO:0003723
Pste2g03369 1002 ProSiteProfiles Pumilio RNA-binding repeat profile. 655 690 IPR001313 GO:0003723
Pste2g03369 1002 ProSiteProfiles Pumilio RNA-binding repeat profile. 691 726 IPR001313 GO:0003723
Pste2g03369 1002 Pfam Pumilio-family RNA binding repeat 804 838 IPR001313 GO:0003723
Pste2g03369 1002 Pfam Pumilio-family RNA binding repeat 696 727 IPR001313 GO:0003723
Pste2g03369 1002 Pfam Pumilio-family RNA binding repeat 876 909 IPR001313 GO:0003723
Pste2g03369 1002 Pfam Pumilio-family RNA binding repeat 774 796 IPR001313 GO:0003723
Pste2g03369 1002 Pfam Pumilio-family RNA binding repeat 731 764 IPR001313 GO:0003723
Pste2g03369 1002 Pfam Pumilio-family RNA binding repeat 918 949 IPR001313 GO:0003723
Pste2g03369 1002 Pfam Pumilio-family RNA binding repeat 659 693 IPR001313 GO:0003723
Pste2g03369 1002 Pfam Pumilio-family RNA binding repeat 841 873 IPR001313 GO:0003723
Pste2g03369 1002 ProSiteProfiles Pumilio RNA-binding repeat profile. 727 763 IPR001313 GO:0003723
Pste2g03369 1002 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 109 970 - -
Pste2g03369 1002 ProSiteProfiles Pumilio RNA-binding repeat profile. 914 949 IPR001313 GO:0003723
Pste2g03369 1002 CDD Pumilio 650 970 IPR033712 GO:0003723
Pste2g03369 1002 SMART pum_5 727 762 IPR001313 GO:0003723
Pste2g03369 1002 SMART pum_5 763 798 IPR001313 GO:0003723
Pste2g03369 1002 SMART pum_5 872 907 IPR001313 GO:0003723
Pste2g03369 1002 SMART pum_5 799 835 IPR001313 GO:0003723
Pste2g03369 1002 SMART pum_5 655 690 IPR001313 GO:0003723
Pste2g03369 1002 SMART pum_5 836 871 IPR001313 GO:0003723
Pste2g03369 1002 SMART pum_5 914 949 IPR001313 GO:0003723
Pste2g03369 1002 SMART pum_5 691 726 IPR001313 GO:0003723
Pste2g03369 1002 Gene3D - 636 976 IPR011989 -
Pste2g03369 1002 MobiDBLite consensus disorder prediction 519 556 - -
Pste2g03369 1002 FunFam Pumilio homolog 1 isoform 2 635 981 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03369 Pste-Chr2 33753456 33768316 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03809 6 27304523 27308534 Pste2g03369 2 33753456 33768316 PCT