Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03152 GCAAAACCATCTTTGGCTCACCCATCACACAGCTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCGATCCTCAGACTCAAAATCAAAAATATTTGTTCCAACAACAATCCCAACCCTTTGCGCCAATCAACGACCCCACACTCAAAAAATTTCCCTCAATTTCTCTCTCTCTCTCTCTCTCTCCCTTAAACCCCTCCTTTTCCCAATTGCCATGCCAGCTTCTCCTTCAGACAACCGGACCCGATGGAGGAAGCGCAAGAGAGATTCGCAAATCACCCGGCGCCACCACAAGCACGACGACGACGACGACGACGACGAAGAAAACCCCAATGCCGAGGAGGACTACGATTCCGAGGAACAGACTCACCACCACAACAACAGCCACCCTAATACGCAACCGCACCTCGAGACTGAGGTCCTCTCCGACCACGCCGTTCAGATTTCGCACTTCCCGCCGGTCATTAAGCGCTCCGTCAACCGCCCTCACTCCTCCGTCACCTCACTCGTCGCCCTGGAGCGGGCCCTCGAGGCCGGAGACAGCAAGTCTCACAGCGCTCTCTCTCCTCCTTTTCTCGAGAACGTCTCTCACGGCCAGCTTCAAGCTCTATCTGCTGTGCCCTCTGATAACTTCTCTTTCGACGGTGATCCCTCTTTTGTCATCTCTCCCCCTCCTATCTTGGAAGGTCGAGGCGTTGTTAAGCGCTTTGGAGCTAAGTCTCTTGTAGTTCCTATGCATTCAGATTGGTTTTCACCTGCCACGGTGCATAGGTTGGAGAGGCAAGTAGTGCCGCATTTCTTTTCAGGGAAATCGCCGGATCATACTCCAGAGAAGTACATGGAGTGTAGGAATTGCATTGTTGCGCTGCACATGGAGGATCCTGGTAAAAGGATTACGGTTTCTGATTGCCAGTGTTTCTTGTCTGGAGTTGATGTTGAGGATTTGACTAGGATAGTCCGGTTCCTGGATCATTGGGGAATTATTAATTACTGTGTTCGGATGCCCAGTCATGAGTCTCTCAATGCTGTCTCTTGCCTGAGGGAGGAGCCAAGTGGTGAAGTCCGTGTACCGTCTGAGGCTTTGAAATCTATAGATAGTTTGATCAAATTTGACAAGCCCAACTGTAAGCTGAAAGCAGACGAAATTTATTCGGCCTTGACTGCACATAATGCCCAAGTGTTCGATCTGGAGGACAGAATAAGAGAGCATCTATCTGAGAATCACTGCAATTATTGTTCTCGTCCTCTTCCTGTTGTATACTATCAGTCTCAAAAAGAGGTCAAGTTTGGCAGTTTATTCCTCGAAAAAGGGAACCAGTGTGCTGCTAAAACTTCCATGCTAGCAAATGTGAGTTGCAACTTTGCTCTCGGCTTGATCTTCTGCAGCTCAAAGAATATCTACTCAGAAACAATCCACCCCATTAGGTTGCTGCCACAGAAATTATGCAAGTTAACCTTTCTTGCCAAAGATTGGCATTCATTTGACATCTCTTCATGGCTTGTTGATATTTTGCTCTGCACTGACTGTTTTCATGATGGGAGATTTGTCATTGGGCATTCAAGTATAGATTTTATAAGGGTAGATTCAACAAGGGATTATGGTGAACTAGACGTGGATAGTTGGACTGATCAAGAAACTTTGCTACTTCTTGAAGCTATGGAGATTTACAATGAGAATTGGAATGAAATTGCTGAGCATGTTGGTACCAAGTCAAAAGCACAGTGCATTCTGCATTTTCTCCGTCTACCCATGGAAGAAGGAAAATTGGAAAATATCAATGTTCCAAGCATGTCTTTGTCATCCAATGCAACAAGTAGAGATGGTAGTGGAAGACTGCATTGTTACTCAAATGGAGATACTGCAGGACCTGTGCATCCAATCAGAGATTCTGATAGCCGGCTTCCTTTTGCAAATTCAGGAAATCCTGTTATGGCTTTGGTTGCCTTTTTAGCCTCTGCGGTTGGACCAAGAGTAGCTGCTTCTTGTGCTCATGCAGCATTAGCAGTATTATCAGAGGATAATTCTAGCAGCACATCACAGATGGAAGCACCAGCACATGATAATAGGACAAATTCAGAAAGCATACATGGTCGAGATGGTGGCCCTCATGGAGAAGCAGCAGTTACAAATAATCATAATGAGGATAAGGCTAAGGTACATGGTTCATGGGGTCTAAATGAGGGTAGGACAACCCCACTCTCTGGGGAGAAAGTTAAAGATGCAGCTAAAGCAGGCCTCTCTGCTGCAGCAATGAAAGCAAAATTGTTTGCTGATCATGAAGAACGAGAAATTCAGAGGTTATGTGCTAATATAGTTAATCATCAGCTGAAAAGACTGGAATTGAAGCTGAAACAGTTTGCAGAAATTGAAACATTCTTGATGAAAGAATGTGAACAACTGGAGAGAACAAAGCAAAGGTATGCTGCTGAACGGTCCCGCGTAATATCGGCACGTCTTGGAACTGCAGGATCCACACCCACCATGAATGCATCGGGTGTTGGTCCTTCAATGGCTAGTAATGGCAACAATAGGCAACAAATGATCTCTGCTTCTCCTTCACAGCCCAGCATCTCAGGTTATGGCAACAATCAGCCTGTTCATCCACATATGTCCTTTGCCCCACGACCTTCAATGTTTGGGTTGGGGCAAAGATTGCCCCTATCTATGATACAACAATCACAATCAACTTCTTCAACTGCCATGTTCAACTCCCCTAGTAATGTGCAGCCAACTTCCAATCATCCATTGTTGAGGCCTGTTTCAGGAACTAACTCTGGTTTAGGTTAATTAAGGGGTGTAGATGTAAGTTTTTGAACTTAAAAGGTGTAATTGTATTTGGCAATTGATTTCAGAAGTGAAGAGGAAGTTAGGTGGATGTGCCAAAAAGTTTAGTCTGTAGAGCCTGTAATTGGTTGCAGTTGATTGTGAAACTGATATGCTTAAAGGAAATAAGTAGCATTTGATATTCCAT 2972 0.4519 MPASPSDNRTRWRKRKRDSQITRRHHKHDDDDDDDEENPNAEEDYDSEEQTHHHNNSHPNTQPHLETEVLSDHAVQISHFPPVIKRSVNRPHSSVTSLVALERALEAGDSKSHSALSPPFLENVSHGQLQALSAVPSDNFSFDGDPSFVISPPPILEGRGVVKRFGAKSLVVPMHSDWFSPATVHRLERQVVPHFFSGKSPDHTPEKYMECRNCIVALHMEDPGKRITVSDCQCFLSGVDVEDLTRIVRFLDHWGIINYCVRMPSHESLNAVSCLREEPSGEVRVPSEALKSIDSLIKFDKPNCKLKADEIYSALTAHNAQVFDLEDRIREHLSENHCNYCSRPLPVVYYQSQKEVKFGSLFLEKGNQCAAKTSMLANVSCNFALGLIFCSSKNIYSETIHPIRLLPQKLCKLTFLAKDWHSFDISSWLVDILLCTDCFHDGRFVIGHSSIDFIRVDSTRDYGELDVDSWTDQETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPMEEGKLENINVPSMSLSSNATSRDGSGRLHCYSNGDTAGPVHPIRDSDSRLPFANSGNPVMALVAFLASAVGPRVAASCAHAALAVLSEDNSSSTSQMEAPAHDNRTNSESIHGRDGGPHGEAAVTNNHNEDKAKVHGSWGLNEGRTTPLSGEKVKDAAKAGLSAAAMKAKLFADHEEREIQRLCANIVNHQLKRLELKLKQFAEIETFLMKECEQLERTKQRYAAERSRVISARLGTAGSTPTMNASGVGPSMASNGNNRQQMISASPSQPSISGYGNNQPVHPHMSFAPRPSMFGLGQRLPLSMIQQSQSTSSTAMFNSPSNVQPTSNHPLLRPVSGTNSGLG 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03152 857 MobiDBLite consensus disorder prediction 602 617 - -
Pste2g03152 857 SUPERFAMILY Homeodomain-like 170 262 IPR009057 -
Pste2g03152 857 MobiDBLite consensus disorder prediction 602 666 - -
Pste2g03152 857 FunFam SWI/SNF complex subunit SMARCC2 isoform C 466 516 - -
Pste2g03152 857 Gene3D - 176 263 IPR036388 -
Pste2g03152 857 FunFam SWI/SNF complex subunit SMARCC2 isoform c 176 264 - -
Pste2g03152 857 ProSiteProfiles SANT domain profile. 465 516 IPR017884 -
Pste2g03152 857 ProSiteProfiles SWIRM domain profile. 170 268 IPR007526 GO:0005515
Pste2g03152 857 MobiDBLite consensus disorder prediction 1 64 - -
Pste2g03152 857 Pfam SWIRM domain 173 259 IPR007526 GO:0005515
Pste2g03152 857 ProSiteProfiles Myb-like domain profile. 469 512 IPR001005 -
Pste2g03152 857 SMART sant 466 514 IPR001005 -
Pste2g03152 857 PANTHER SWI/SNF COMPLEX-RELATED 63 744 - -
Pste2g03152 857 Pfam Myb-like DNA-binding domain 469 511 IPR001005 -
Pste2g03152 857 Coils Coil 686 706 - -
Pste2g03152 857 Coils Coil 719 739 - -
Pste2g03152 857 Pfam SWIRM-associated region 1 673 750 IPR032451 -
Pste2g03152 857 SUPERFAMILY Homeodomain-like 469 520 IPR009057 -
Pste2g03152 857 CDD SANT 469 511 IPR001005 -
Pste2g03152 857 Gene3D - 468 516 - -
Pste2g03152 857 MobiDBLite consensus disorder prediction 819 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03152 Pste-Chr2 31461149 31468031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03152 430 508 EF-hand Containing Proteins AT3G07740 34.483 1.54e-07 53.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03152 2 31461149 31468031 Pste2g03152 2 31461149 31468031 ECH
Pste8g01972 8 15368476 15374896 Pste2g03152 2 31461149 31468031 PCT