Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03137 ATGGCCTTCACGAAGAAAATCTGTGCTCTAATTATGTGCTTTGCACTGGTTTATTGTGTGGATGCTGCAAAAAAGGTAATGCCAATTGCTAGTCCTGATATCTACAAGGGTACAAATTTAGCCAAGGATACCCTTGCTCCAGGAGAGAAGATAGTTAATGTCATGAAGTTTGGAGCCAAACCAGATGGCAAGTTTGACTGCACTCAGGCTTTCATGGATGCATGGAGAGCAACTTGCAAAACCAAAGAGCAATCCAGACTACTGATCCCTAATGGAAGATTCGTGGTTTCTACAATGTTTTTCTCAGGGCCATGTTTGAATCCAGGTCCCATAACAATTCAAGTTGTAGGCACTATTGTGGCTACAATAGATCCCAGCGAGTATGTGAATGGTGAATGGCTCATATTTGAGGACCTGGATGGTATAAAACTTATTGGTGGTGGTACCTTTGATGGCATGGGTAAGAAATCATGGGCAACAGCTGAGAACTGTGAAATAGAGTCCTCCACCACTTGTATCAGAAACCCTAGTAGTATTTATTTCCACAAAGTTAGGAATGGATTAATACAGAACATCAAATCCGTAGACCCCAAAGGCTTTCATATATTTGTCACTAATTCTGTTAACATCAGACTTCGATTGCTTAGGCTCAGTGCACCAGCTACCAGCCCCAACACCGATGGAATTCATCTTAGCCAATCCATCGATGTAAAATTATCCAAAAATACCATTGAAACTGGAGATGATTGTGTTTCCATGATACAAGGAGTCACACAAGTTAGCATCAACAAAATGAAATGTGGTCCTGGACACGGTATTAGTATTGGAAGTCTTGGAAAGTATAAGGATGAGCTAGAAGTGAAAGAAATTAAAGTCGAGAACTGCACGTTGGTTGGAACAACCAATGGCCTCAGAATCAAGGCATGGCCTGACAAGTTTCCAGGTGGAGCATCAAATATCACCTTCAGTAACATTATCATGGACAACGTTAAAAATCCTATCATCATTGACCAAGAGTATGAATGCTTTCCAAACTGCCAAAAGAAGCCTTCACTTGTACAGATAAAAGGTATTAGTTTTTCAAATATAAGGGGAACCACAATTTCACCAATTGCAGTGGATTTAAGGTGTAGCAAACAGTTTCCCTGCCAAAATGTTCAGCTTAGAAACATAGACCTGAATCATGGACCCAAGCCTGCTGACTCTAGATGCGCCAACATTAAACCGGTTTATGGAGGCATACAAAGACCAGCAGCTTGCCTATAA 1266 0.41 MAFTKKICALIMCFALVYCVDAAKKVMPIASPDIYKGTNLAKDTLAPGEKIVNVMKFGAKPDGKFDCTQAFMDAWRATCKTKEQSRLLIPNGRFVVSTMFFSGPCLNPGPITIQVVGTIVATIDPSEYVNGEWLIFEDLDGIKLIGGGTFDGMGKKSWATAENCEIESSTTCIRNPSSIYFHKVRNGLIQNIKSVDPKGFHIFVTNSVNIRLRLLRLSAPATSPNTDGIHLSQSIDVKLSKNTIETGDDCVSMIQGVTQVSINKMKCGPGHGISIGSLGKYKDELEVKEIKVENCTLVGTTNGLRIKAWPDKFPGGASNITFSNIIMDNVKNPIIIDQEYECFPNCQKKPSLVQIKGISFSNIRGTTISPIAVDLRCSKQFPCQNVQLRNIDLNHGPKPADSRCANIKPVYGGIQRPAACL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03137 421 FunFam Pectin lyase-like superfamily protein 40 418 - -
Pste2g03137 421 Pfam Glycosyl hydrolases family 28 79 408 IPR000743 GO:0004650|GO:0005975
Pste2g03137 421 SUPERFAMILY Pectin lyase-like 48 421 IPR011050 -
Pste2g03137 421 ProSitePatterns Polygalacturonase active site. 264 277 IPR000743 GO:0004650|GO:0005975
Pste2g03137 421 SMART pbh1 317 338 IPR006626 -
Pste2g03137 421 SMART pbh1 234 277 IPR006626 -
Pste2g03137 421 SMART pbh1 207 233 IPR006626 -
Pste2g03137 421 SMART pbh1 287 308 IPR006626 -
Pste2g03137 421 PANTHER - 50 407 - -
Pste2g03137 421 Gene3D - 38 418 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03137 Pste-Chr2 31250414 31253593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03137 51 420 Glycoside Hydrolase AT4G18180 43.299 2.10e-101 306
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03137 2 31250414 31253593 Pste2g03137 2 31250414 31253593 ECH
Pste6g04083 6 30104725 30106916 Pste2g03137 2 31250414 31253593 PCT