Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03118 TATGTACATGTCCATGTTTGAAAGGACTATTAATCTTCTCCTTTTCTGTGCGTAGATTAATGCTTATAATAATACTCACAAAACTGCATAAAGCTGCTTCTGTTCCCGTAGCTGGTTCTTCTTCCTCTTTTTCCCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTGCTTCTGCTGCAATTTCTTTCTTTTTTTTTCTTTTCTCTTGGACTCTGACCCTGTTGCCAGCTTTGACTCGAGAAGATGCTTGATATCTTCTGAGAATCAATGGGTTGCATTTTGCTTTTTCTACCCTCTTTCAGGTGGCATTGCTCTTGCTGGTGGCATTGAGCAATGCCGTGAGAGTTAATGGAGATGGTGGGCAATGCGGTACCAACCAAACACTAGACCCAAGACCACACAGTGTCTCCATTTTGGAGTTTGGTGCTGTTGGAGATGGTAAAACACTCAACACTATCGCATTCCAGAATGCCATCTTCTATCTCAAGTCATTTGCTGATAAGGGTGGGGCTCAGCTATATGTGCCACCGGGAAGATGGCTCACTGGAAGCTTCAATCTCACCAGCCATCTCACCCTCTTTTTGGAAAAAGGTGCTGTCATTATTGGAACTCAGGATCCATCACATTGGGACGTTGTTGAACCCTTGCCTTCTTATGGCCGAGGGCTAGAAGTTCCTGGGGGAAGATACCAGAGCTTGATAAATGGATACAAGTTACATGATGTGGTCGTAACAGGTAATAATGGAACCATTGATGGCATGGGAATGGTTTGGTGGGAGTGGTATAGCTCCCATTCCTTGAACCACAGCCGTCCTCATCTGGTTGAAATTGTGGCATCTGATTATGTGGTGGTTTCAAATCTTACATTCTTGAATGCCCCAGCTTATAGCATACACCCGGTTTATTGCAGCCATGTACATATTCAAAACGTTTCAATCTCTAATCCTCCAGAATCCCCTTATACTCTCGGTATAGTTCCAGATTCGTCTGATCATGTGTGTATAGAAGATTGTATTGTTGCCATGGGATATGATGCAATTTCTCTCAAAAGTGGCTGGGATGAGTATGGCATTGCCTATGACAGACCAACTGAGAATGTACACATCAGGAGGGTGCATCTTCATGCATTTTCTGGCTCTGCTCTTGCTTTTGGCAGTGACATGTCTGGCGGCATTTCAAATGTTCTGGTGGAACATGCTCATCTTTTAAACTCAAATAGTGGCATTGAGTTCAGAACCACCAAAGGAAGAGGTGGTTATATGCAAGAAATTATTATATCAGACATACAAATGGAGAATGTCCACACGGCAATTGCTGCAAAAGGTAATTGTGGCTCGCATCCTGATGACAAGTTTGATCCAAAGGCACTCCCACTTTTGGATCACATTACTTTGAAGGATGTCACAGGTACAAATATTACCATTGCTGGAAACTTTACTGGAATAGAGGAATCCCCTTTCACAAACATATGCCTTTCCAACATAACCTTGTCTACAAATTCTGTTTCTCCCTTTACTTGGGAATGCTCAAATGTGTCTGGATTTTCAGACTCAGTGCTCCCAGAACCTTGTCCAGAACTTGGGAACCCCTTACATGATTCTTCCTCGTCCTGTTTCTACCTGTCGAGTGTCATTGGCAAAACTGCAGTGCAGTGATAAAATCCTTTTCTCAACAGAAGAAGATTCTTATTCTTGAGTACCCTGCTTGATGTTGATGAAAAAGTGAATGGCCATTTGCCATCAAAGATTAGGCCACATTCTTTCCAATAAAACGATTGTGAGGATTATTCATTTTTTCATCCCTTAGATTTTTCTTGCATGTTCCTACCAGCACATTATTTGTACAGCTTCATTTCTTCATTCATGTGTAAGGAAATTTTGGTAGTGCCGCCACAGAAGGACTCAAAAGTTTGATAGTTTTGCATTAGTTCCATTGTGATTTCACTCTGTAAAGCATGTAGTGGATTTGGTGATACTTCAATTAAAGAAAGTTCAACTTTTTGTTATCGTTATCCATGTCTTAGTAGTGTTGTCATGCCTGCAATTTTTAATCACTAT 2054 0.4153 MGMVWWEWYSSHSLNHSRPHLVEIVASDYVVVSNLTFLNAPAYSIHPVYCSHVHIQNVSISNPPESPYTLGIVPDSSDHVCIEDCIVAMGYDAISLKSGWDEYGIAYDRPTENVHIRRVHLHAFSGSALAFGSDMSGGISNVLVEHAHLLNSNSGIEFRTTKGRGGYMQEIIISDIQMENVHTAIAAKGNCGSHPDDKFDPKALPLLDHITLKDVTGTNITIAGNFTGIEESPFTNICLSNITLSTNSVSPFTWECSNVSGFSDSVLPEPCPELGNPLHDSSSSCFYLSSVIGKTAVQ 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03118 298 PANTHER PECTIN LYASE-RELATED 2 277 - -
Pste2g03118 298 Pfam Glycosyl hydrolases family 28 2 260 IPR000743 GO:0004650|GO:0005975
Pste2g03118 298 SUPERFAMILY Pectin lyase-like 2 274 IPR011050 -
Pste2g03118 298 Gene3D - 1 264 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03118 Pste-Chr2 31088719 31091728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03118 1 274 Glycoside Hydrolase AT3G06770 61.314 5.23e-121 352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03118 2 31088719 31091728 Pste2g03118 2 31088719 31091728 ECH
Pste6g04068 6 29972119 29974854 Pste2g03118 2 31088719 31091728 PCT