Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03116 CAACATGGAGGTTCTCATTTTCGAAGAGGAGTTTACTAGCAGTGTCAACCCAGGAAGGTTGTTCAAGGCTTTGATCCTTGATGCTTCAAACCTCATCCCCAAGCTCATGCCTGAGGCCATCAAGAATGTTCAACTGATTGAAGGGAATGGAGGCCCTGGAAGCATTCAGGAGATCACTATTGCTGAAGGCCGAATTGAAGCAATAGACCAAGAGAAATTGACTTACAGCTACGCAGTGATTGAGGGGGATGGTGCACTGGAAAAAGTGGATTCAATTTCACATGAGATTAAGTTTGAGGCCACTGAAGAGGGAGGTTGCAAGACCAAGAATGTCAGTAAGTATCATCCCAAAGAAGGGGTTGATGTCAAAGAGGAGGATTTCAAGGCTGCAAGGGAGGAAAGTTTGGCTCTCCTGAAGCCCTCTCCAATCTCTCCAGCAAGGTTGTTCAAGGCATTGGTTGTTGATGCTCCCAACCTCATTCCCAAACTTCTACCACATGCTTTGAGGAGCATTGAACTCATACAAGGAGATGGTGGGGCTGGAAGCATTAAGCAGTTTAACTTTGTTGAAGGTAGCCAAGTGAAAAGCATCAAGAACCGGGTTGATGAGATAAACGAGGACACATTTACCTACAATTACACATTGATTGAAGGTGAAGCATTGAAGGATAAGTTTGTATCCATTGCTCATGAGATTAAATTTGAAGCAGCACCTGATGGTGGTAGCATAAATAAGGTAACAAACAAGTATTATCTTAAAGGTGATGTTGAGATCAATGAAGAGGACATTAAGGCTAGCAAGCAGAAGGTCTTGGGCATTTTCAAAGTTGTGGAAACCTACCTTTTGCAGAACCCTGATTATCGGCCTCACAAGTCTGTTTTACGACTTCTGTTTGACAGTGGCATTGAATTCAGAATGAAATTGTTATGCAAGAGAGAATGGTTTCTTGCTTCCAAATTAATGTTCTCTTTTGTGCAAATAAATCCACAGGCACTAATTATATCAATCACAACTTTTACACATGATTATTCGTCCCCTGTTGCTCCATCACGCTTGTTCAAGGCCTTGATCACTGACTCTAGAAATTTGTTTCCAAAGCTCTTACCACAGTTCATAAAAGAAGTCAACGTGATCCAAGGAGATGGGGAAGCTGGCAGCATTGAACAAGTTAACTTTGCTGAAGGTATCCCCTTCAAATATGTGAAACACAGGATTGATGAAGTTGATAAGGACAACTTGGTTTGCAAATACACTATGATTGAAGGGGGTCCATTGGGGAACAAGCTTGAGTCTATAGTTTATGAGGTTAAGTTTGAGGCCACTAGTGATGGAGGCTGCCTCTGTAAAATGACAAGCACATACAATTCTGCAAAGTGGTGGAAGCCTATCTACAGGAGAATCCACAAGCATATGCTTGATTATTCATTTGTTTCTCTCAATGTGCAACCAGACATAGGGACAATTAGAGTGTGTGCAAATAAAAAAGTTGGAGATTCAGTATCCTCTTTACGATTTAATAGAGCATTACACTGTGATGGTAAAATTCTATCATATCATTGTGCAACTGATGAGACAAAAGCAGCGCAATTCAACGCATGCATAGCCAGATTGTATATTCCCCGTGATAAAGAAAAGATATTGTCACTTCTTTCTGGCACTTTACCT 1666 0.413 MEVLIFEEEFTSSVNPGRLFKALILDASNLIPKLMPEAIKNVQLIEGNGGPGSIQEITIAEGRIEAIDQEKLTYSYAVIEGDGALEKVDSISHEIKFEATEEGGCKTKNVSKYHPKEGVDVKEEDFKAAREESLALLKPSPISPARLFKALVVDAPNLIPKLLPHALRSIELIQGDGGAGSIKQFNFVEGSQVKSIKNRVDEINEDTFTYNYTLIEGEALKDKFVSIAHEIKFEAAPDGGSINKVTNKYYLKGDVEINEEDIKASKQKVLGIFKVVETYLLQNPDYRPHKSVLRLLFDSGIEFRMKLLCKREWFLASKLMFSFVQINPQALIISITTFTHDYSSPVAPSRLFKALITDSRNLFPKLLPQFIKEVNVIQGDGEAGSIEQVNFAEGIPFKYVKHRIDEVDKDNLVCKYTMIEGGPLGNKLESIVYEVKFEATSDGGCLCKMTSTYNSAKWWKPIYRRIHKHMLDYSFVSLNVQPDIGTIRVCANKKVGDSVSSLRFNRALHCDGKILSYHCATDETKAAQFNACIARLYIPRDKEKILSLLSGTLP 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03116 554 Pfam Pathogenesis-related protein Bet v 1 family 140 283 IPR000916 GO:0006952
Pste2g03116 554 Pfam Pathogenesis-related protein Bet v 1 family 6 118 IPR000916 GO:0006952
Pste2g03116 554 Pfam Pathogenesis-related protein Bet v 1 family 336 455 IPR000916 GO:0006952
Pste2g03116 554 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 421 453 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03116 554 PANTHER - 140 285 - -
Pste2g03116 554 SUPERFAMILY Bet v1-like 140 286 - -
Pste2g03116 554 PRINTS Major pollen allergen Bet V1 signature 272 282 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03116 554 PRINTS Major pollen allergen Bet V1 signature 178 187 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03116 554 PRINTS Major pollen allergen Bet V1 signature 238 254 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03116 554 PRINTS Major pollen allergen Bet V1 signature 131 151 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03116 554 PRINTS Major pollen allergen Bet V1 signature 154 164 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03116 554 PRINTS Major pollen allergen Bet V1 signature 194 213 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03116 554 PRINTS Major pollen allergen Bet V1 signature 213 226 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03116 554 Gene3D - 3 139 IPR023393 -
Pste2g03116 554 Gene3D - 140 287 IPR023393 -
Pste2g03116 554 SMART Bet_v_1_2 135 283 IPR000916 GO:0006952
Pste2g03116 554 FunFam Major pollen allergen Bet v 1-A 333 462 - -
Pste2g03116 554 CDD Bet_v1-like 6 138 - -
Pste2g03116 554 CDD Bet_v1-like 337 453 - -
Pste2g03116 554 SUPERFAMILY Bet v1-like 5 138 - -
Pste2g03116 554 Gene3D - 334 469 IPR023393 -
Pste2g03116 554 FunFam Major pollen allergen Bet v 1-A 140 287 - -
Pste2g03116 554 SUPERFAMILY Bet v1-like 337 459 - -
Pste2g03116 554 CDD Bet_v1-like 140 280 - -
Pste2g03116 554 FunFam Major pollen allergen Bet v 1-A 1 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03116 Pste-Chr2 31069212 31075338 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03116 2 31069212 31075338 Pste2g03116 2 31069212 31075338 ECH
Pste2g03116 2 31069212 31075338 Pste6g04065 6 29947519 29948558 PCT