Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03110 GAAGAGACCACCTCCAACGTGGCTCCAGCAAAACTCTACAATGTTCTGACAAAAGATGCCGACACCATCATCCCAGAGATTATTGATGTGATCCATAGTATTGAAACCGTTGAAGGAAATGGAAGACCAGGAACCAACAAGAAAATAACTGCAACTGATGTCACACACAGTACAAAGCAATTTAGAAGCCCTCATATAAGTTTTCTTCTGCTTATTATTAATTCTCGATCTCACTCTCTTGTGCCAAAAATCATGGGAATTGTCACTACTGAACGGGAGCAAGTTTGTGCCGTGGCTCCTGCAACATTGTACAAAGCCATGGCCTTCGATTTTGGCAAAGTTCTTCCCAAAGCTATGCCAAACTTCGTCAAGAGAGCTGAAATCATAGGAGATGGAGGGCCGGGATCTGTTAAGAACCTCATTCTTGCTGATGGATATGTGAAGCAAAAGGTAGATGTGGTGGACGAAGAAAACTACGTGTACCACTACACAGTGGATGAAGGCAGTGTATTATTGGAGACATTGGAGAAGGTTCTCCTGATGGAGGATGCATCATCAAGTGCACAATTACATACTTCACCAAAGTGCACAATTACATACTTCACCAAAGGTGATGCGCAACTCACTCAAGAGTTTTTGAAGGCTAACAACGAAACCTCTACTGCCTTCACCAAGGCTGTAGTGGATTATCTTTTGGATCACCTCACAGGAATCAAACAAATTAAAAGAAAGGGAAAGTCCTTTCACAAAATCATGGTAATTATCACTACTGAAAACGAGCTACTTTCTTCCGTGGCTCCTGCCAGACTATTCAAAGCCATTGTTCATGATTCTGCCAATTTTTTTCCAAAAGCTTTACCAAATTTCGTTAAGAGTGTTGAAATCATTGAAGGAGATGGAGGGCCAGGAAGCATTAAGAAGTTCACTCTTTCGGAAGGATATGTGAAGCAAAAGGTGGATGTGGTGGACGAAGAAAACTACGTGTACAACTACACAATAGTTGAAGGGAGTGTTCTCTCAGAAGCATTGGAGAAGGTGAGTAATGAGTACAAATTGGAGGGAAAGAGTGAAGGAGGAAGCATGGTGAAGGTGACACGCAAATACTACACCAAAGGAGATGCTTTGCTCACACAAGACTTTCTCAAAGATACAAAGGACATCACTGCTGACTTTGCCAAGGCTATTGATCTTTATCTTTTGGCTAATCCTCATTACAACTAATTAAATCCCCATATACTGTTTTCGATCGTTGTTCATTCTAGTGCTTAATTATGTGTTCCTCATCTTTTCTTACTTTATATGTTTCAGTGAGAAATTTGAGATTATTTTAAGATTTGTTTATTCTTTTTTTATGTGTGAAATTTAATAGTTGTTTGTGTGTATACG 1386 0.3997 EETTSNVAPAKLYNVLTKDADTIIPEIIDVIHSIETVEGNGRPGTNKKITATDVTHSTKQFRSPHISFLLLIINSRSHSLVPKIMGIVTTEREQVCAVAPATLYKAMAFDFGKVLPKAMPNFVKRAEIIGDGGPGSVKNLILADGYVKQKVDVVDEENYVYHYTVDEGSVLLETLEKVLLMEDASSSAQLHTSPKCTITYFTKGDAQLTQEFLKANNETSTAFTKAVVDYLLDHLTGIKQIKRKGKSFHKIMVIITTENELLSSVAPARLFKAIVHDSANFFPKALPNFVKSVEIIEGDGGPGSIKKFTLSEGYVKQKVDVVDEENYVYNYTIVEGSVLSEALEKVSNEYKLEGKSEGGSMVKVTRKYYTKGDALLTQDFLKDTKDITADFAKAIDLYLLANPHYN 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03110 406 SMART Bet_v_1_2 256 402 IPR000916 GO:0006952
Pste2g03110 406 SUPERFAMILY Bet v1-like 2 53 - -
Pste2g03110 406 CDD Bet_v1-like 89 231 - -
Pste2g03110 406 Pfam Pathogenesis-related protein Bet v 1 family 256 401 IPR000916 GO:0006952
Pste2g03110 406 Pfam Pathogenesis-related protein Bet v 1 family 91 233 IPR000916 GO:0006952
Pste2g03110 406 FunFam Major pollen allergen Bet v 1-A 252 406 - -
Pste2g03110 406 SUPERFAMILY Bet v1-like 88 233 - -
Pste2g03110 406 Gene3D - 80 236 IPR023393 -
Pste2g03110 406 Gene3D - 1 63 IPR023393 -
Pste2g03110 406 PANTHER - 2 58 - -
Pste2g03110 406 PRINTS Major pollen allergen Bet V1 signature 332 345 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03110 406 PRINTS Major pollen allergen Bet V1 signature 277 287 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03110 406 PRINTS Major pollen allergen Bet V1 signature 357 373 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03110 406 PRINTS Major pollen allergen Bet V1 signature 313 332 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03110 406 PRINTS Major pollen allergen Bet V1 signature 391 401 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03110 406 PRINTS Major pollen allergen Bet V1 signature 254 274 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03110 406 FunFam Major pollen allergen Bet v 1-A 85 236 - -
Pste2g03110 406 CDD Bet_v1-like 256 399 - -
Pste2g03110 406 SUPERFAMILY Bet v1-like 255 406 - -
Pste2g03110 406 Gene3D - 252 406 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03110 Pste-Chr2 31043875 31057372 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03110 2 31043875 31057372 Pste2g03110 2 31043875 31057372 ECH
Pste2g03110 2 31043875 31057372 Pste6g04061 6 29905539 29906394 PCT