Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03098 CAGAGCTCTCTCTCTCTCTCTCTGCTTCAAGTGTCCAAACTATTTCTTTCTCTTTTGTCTTTTGTTTTCATCACAATCTCTGTTCTGGTTTTGAGATACCGATCAATCCCTTCTTCCCAAGATGGATGAGAAAACCTGGCGAATTCCATCATCCAAACTTTTGTTCTTTCTTCTCCTTTCTGCCATTTTTTCAACATCTTTCTCCGAAATCGATAAGGTTCTCGAGGACCTAAAATCCTCTGCTTCTGTGGCTTTCCAGATTAAAGGAAATGTATATCCACTTGGGTATTACACCGTGAGACTTGCCATTGGCGATCCCCCTAAGTTTTATGATCTTGACATTGACACCGGTAGTGATCTCACTTGGGTTCAGTGTGACGCGCCATGCAAAGGCTGCACCGTTCCTCAGAATCAACTTTATAAACCTCATCGCAACCTTGTGGAATGTGGACATCCTACGTGTGCTGCAGTCCAGTCATCACCACCAAACCACCAGTGTACTGACCCAAAAGGACAGTGTGATTATGAGGTTGAGTATGCAGACCAAGGATCATCTCTGGGTGTGGTAGTCCATGATCTTTTTCCCCTTAAATTTACTAAGGGTACGCCCTCGACTGGCCTTCGGCTACAATTACGCACCTTCCTAAATAATCAAGATTTCCTTGTTCTGTTACATGCTAGTTGTGGATATGATCAAACACACGTTGGTCATAATTCCCCACCTTCCACAGCAGGGGTTCTTGGCCTTGGGAATGGCAAAGCAGGCATTTTGTCTCAGCTTCAGTCTCGTGGCCTAATTCGCAATGTGGTAGGCCACTGCTTAAGTGGGAAAGGAGGAGGGTTTTTATTCTTTGGAGACCAACTCGTTCCAAAATCTGGAATTATTTGGATACCCATATTGCCGAGCTCCTCAGCACAACACTATAAAACAGGTCCAGCAGACCTATTTTTCAATCAAAAGCCTACTTCAGTCAAGGGTCTTGAACTAATCTTTGATAGTGGGAGCTCCTACACATACTTCAATTCCCAAGCTCATAATGCTCTTGTTGCTCTTATAACTAATGATATAAAGGGAAAGCCATTGAGTAGAGCAACCGAGGATCCATCACTAGCAATTTGTTGGAAGGGTCCAAAGGCTTTTAAATCTCTTCATGATGTCAGTAGCAATTTTAAGCCCCTAGTACTGAGCTTCACAAGATCAAGGAATTCCCTGCTGCGAATACCACCAGAAGCTTATCTAATTGTCACTACACATGGCAATGTCTGCTTGGGGATTCTAGATGGCACTAAAACAGGACTTGGAAATATTAACATAATTGGAGATATCTCTTTACAAGATAAGTTAGTGATTTATGACAACGAGAAACAGCAGATTGGGTGGGCCTCTGCCAATTGTGATAGACTTTCCAACACA 1414 0.4307 MDEKTWRIPSSKLLFFLLLSAIFSTSFSEIDKVLEDLKSSASVAFQIKGNVYPLGYYTVRLAIGDPPKFYDLDIDTGSDLTWVQCDAPCKGCTVPQNQLYKPHRNLVECGHPTCAAVQSSPPNHQCTDPKGQCDYEVEYADQGSSLGVVVHDLFPLKFTKGTPSTGLRLQLRTFLNNQDFLVLLHASCGYDQTHVGHNSPPSTAGVLGLGNGKAGILSQLQSRGLIRNVVGHCLSGKGGGFLFFGDQLVPKSGIIWIPILPSSSAQHYKTGPADLFFNQKPTSVKGLELIFDSGSSYTYFNSQAHNALVALITNDIKGKPLSRATEDPSLAICWKGPKAFKSLHDVSSNFKPLVLSFTRSRNSLLRIPPEAYLIVTTHGNVCLGILDGTKTGLGNINIIGDISLQDKLVIYDNEKQQIGWASANCDRLSNT 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03098 431 Gene3D Acid Proteases 266 431 IPR021109 -
Pste2g03098 431 FunFam Aspartic proteinase Asp1 isoform A 250 429 - -
Pste2g03098 431 SUPERFAMILY Acid proteases 50 429 IPR021109 -
Pste2g03098 431 FunFam Aspartyl protease family protein 34 246 - -
Pste2g03098 431 PANTHER ASPARTYL PROTEASES 49 419 IPR001461 GO:0004190|GO:0006508
Pste2g03098 431 Pfam Xylanase inhibitor C-terminal 288 421 IPR032799 -
Pste2g03098 431 Gene3D Acid Proteases 34 246 IPR021109 -
Pste2g03098 431 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 289 300 IPR001969 GO:0004190|GO:0006508
Pste2g03098 431 Pfam Xylanase inhibitor N-terminal 57 246 IPR032861 -
Pste2g03098 431 PRINTS Pepsin (A1) aspartic protease family signature 63 83 IPR001461 GO:0004190|GO:0006508
Pste2g03098 431 PRINTS Pepsin (A1) aspartic protease family signature 289 300 IPR001461 GO:0004190|GO:0006508
Pste2g03098 431 PRINTS Pepsin (A1) aspartic protease family signature 397 412 IPR001461 GO:0004190|GO:0006508
Pste2g03098 431 ProSiteProfiles Peptidase family A1 domain profile. 57 421 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03098 Pste-Chr2 30926752 30929649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03098 39 431 Miscellaneous Gene Families AT1G44130 55.838 3.85e-156 446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01965 8 15200079 15203502 Pste2g03098 2 30926752 30929649 PCT