Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02770 ATGGACGACCACATCACCATGAAAATGCTGCAGATGTCAGACGACAACAGAAGAATCGCAGCTGCTGAGGACGCAGGAGCCAGGCACAGACACCACCGTGTCTCCGCGTCCTTCACCCTGACCACGTGGCCGTTGGGTCCCCATTACGAGGCTCCCTCCCACCTTTTCGGCACCACCTCCCTCTCCCTCTCCCTCTCCTCTCCTCTCTCTCCTCTCCCAAATTGTGGCTCGACCCCAACCCCAACCCCAACCCCAACCCCAACCCCAAACCCTTCCACTCTCACACTCACTGACCCCATGTGGCCCCACGATCTCTCCCTCGCCAACGATTTCTCCAGAATGAACCTCTTCGATGCCCCCCAAACCGCTTTGGACTCCTATGCTTCTTTTTTCAATGAAACTGGAACCCTCTCCTATCATCACCACGTCAACAACGTCGGTTTGGGTTTGGGTTTGGACCCCTACTCTTCCGGAACCCTCTCTTACCACCACCATCTTAACAATGCCGCTTTGTTCGATAAAGCTTACACTTTTGCCACCCCCGATGATCACGCCAACCACCTCTATCATCATCTTGTCGACCAGAGGAGGAAGCACCTGCAGAGCACCAGTGATGCAAACTATCAGATTCTCCGTGATCGTTATATGGCTTCTCACTCTCTCGCTGGAGTCAAAAGCCCCGTTAGGTTTTCTCAGATACCCCCTCAGTATCCCAATGCCAATAATGCCTCGCATTATTACGTTGCACCAAAAGAAAAGCCTGAACTTTCTCATTTTCTGACTCCCCGGAGAATGGGCCCAGACCCTGCTGCTTTTAGGTGTGACAATAGCGTTATCATACAAGGGAAAGACGTCAAACACTGCTTTGAGAACGGTTACGGTACCTATCGAAGGGCTACCCGTGATGATTTTGGTCTGGGTGTGGGTGCCAGTGTTTCTACTAAGAACTTTTATTCAGCTGCTTCTTCTGGTCTTAAGAATGGTGATTTCTCACTGCCCATGCAGCTGGATTTTTATTCTGTGCCTGACGCTCAGTGCTACATATACAACCTGGCAAAGGATCAGAACGGTTGTCGTTTTCTGCAGCGCATGGTGGATGAGGGCTCCTGCCAAGATATCTGTATGGTATTTGATGGAATCATTGCAAGTGTTGTTGAACTTATGATAGACTCTTTTGGGAATTATCTTGTGCAGAAGTTGCTCGATGTTTGCACTGATGATCAACGGCTGCAGATTGTGCTCATGTTGACCAATCAACCTGGCCAGCTCGTTAGAATCTCTTTAAATACTCATGGCACACGCGTGGTGCAGAAGTTGATTGAGACCCTCACCACGGCGGAACAGGTTTCATTGGTGAAGTCTGCCATTCAACCGGGTTTTCTTGATCTTATTAAGGACTTGAATGGAAATCATGTCATTCAACGTTGCTTGCAATGCCTTAGCTGTCAAGATAACCAGTTTATCTATGATGCTGCTGTGAAGTTTTGTGTTGAAATAGCTACTCATCAGCACGGATGTTGTGTACTGCAACGCTGCATCTACCACTCTGTGGGAAAAAATCGAGACAAGTTAGTCAATGAAATATGCAAACATGGACTTCTCCTCGCTCAAGATCCATTTGGAAATTATGTTGTTCAGTATGTTATAGAGATGGATACCCCAACTGCCACAGCCAAAATGCTTAGTCAGTTCAAAGGGAACTATGTAAACTTGTCTACACAGAAATTCAGCAGTCATGTGGTTGAAAAATGCCTTAAGCATGTAACAGACTGCAGGTCAAGGATAATTCGAGAATTGCTATCTGCTCCTCACTTTGAACAGGTGTTGCAGGACCCATATGCCAACTATGTCATTCAATCTGCTCTAGCTGTCACCAAGGGTCCTCTTCATGCATCTCTGTCTGAAACATGTCGTCATTACAAAATGCTGCGCACCAGTCCATATTGCAAGAGGATTTTCTCTGGAAGCTTGCTCAAGAAGTGA 1983 0.4755 MDDHITMKMLQMSDDNRRIAAAEDAGARHRHHRVSASFTLTTWPLGPHYEAPSHLFGTTSLSLSLSSPLSPLPNCGSTPTPTPTPTPTPNPSTLTLTDPMWPHDLSLANDFSRMNLFDAPQTALDSYASFFNETGTLSYHHHVNNVGLGLGLDPYSSGTLSYHHHLNNAALFDKAYTFATPDDHANHLYHHLVDQRRKHLQSTSDANYQILRDRYMASHSLAGVKSPVRFSQIPPQYPNANNASHYYVAPKEKPELSHFLTPRRMGPDPAAFRCDNSVIIQGKDVKHCFENGYGTYRRATRDDFGLGVGASVSTKNFYSAASSGLKNGDFSLPMQLDFYSVPDAQCYIYNLAKDQNGCRFLQRMVDEGSCQDICMVFDGIIASVVELMIDSFGNYLVQKLLDVCTDDQRLQIVLMLTNQPGQLVRISLNTHGTRVVQKLIETLTTAEQVSLVKSAIQPGFLDLIKDLNGNHVIQRCLQCLSCQDNQFIYDAAVKFCVEIATHQHGCCVLQRCIYHSVGKNRDKLVNEICKHGLLLAQDPFGNYVVQYVIEMDTPTATAKMLSQFKGNYVNLSTQKFSSHVVEKCLKHVTDCRSRIIRELLSAPHFEQVLQDPYANYVIQSALAVTKGPLHASLSETCRHYKMLRTSPYCKRIFSGSLLKK 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02770 660 SUPERFAMILY ARM repeat 345 653 IPR016024 -
Pste2g02770 660 FunFam Pumilio homolog 9 334 660 - -
Pste2g02770 660 ProSiteProfiles Pumilio RNA-binding repeat profile. 563 601 IPR001313 GO:0003723
Pste2g02770 660 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 163 653 - -
Pste2g02770 660 MobiDBLite consensus disorder prediction 74 91 - -
Pste2g02770 660 ProSiteProfiles Pumilio RNA-binding repeat profile. 455 490 IPR001313 GO:0003723
Pste2g02770 660 Gene3D - 335 657 IPR011989 -
Pste2g02770 660 MobiDBLite consensus disorder prediction 67 91 - -
Pste2g02770 660 CDD Pumilio 338 654 IPR033712 GO:0003723
Pste2g02770 660 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 319 660 IPR033133 GO:0003723
Pste2g02770 660 ProSiteProfiles Pumilio RNA-binding repeat profile. 491 526 IPR001313 GO:0003723
Pste2g02770 660 ProSiteProfiles Pumilio RNA-binding repeat profile. 527 562 IPR001313 GO:0003723
Pste2g02770 660 Pfam Pumilio-family RNA binding repeat 567 600 IPR001313 GO:0003723
Pste2g02770 660 Pfam Pumilio-family RNA binding repeat 534 554 IPR001313 GO:0003723
Pste2g02770 660 Pfam Pumilio-family RNA binding repeat 348 381 IPR001313 GO:0003723
Pste2g02770 660 Pfam Pumilio-family RNA binding repeat 384 413 IPR001313 GO:0003723
Pste2g02770 660 Pfam Pumilio-family RNA binding repeat 460 490 IPR001313 GO:0003723
Pste2g02770 660 Pfam Pumilio-family RNA binding repeat 496 529 IPR001313 GO:0003723
Pste2g02770 660 Pfam Pumilio-family RNA binding repeat 610 622 IPR001313 GO:0003723
Pste2g02770 660 Pfam Pumilio-family RNA binding repeat 422 452 IPR001313 GO:0003723
Pste2g02770 660 ProSiteProfiles Pumilio RNA-binding repeat profile. 379 415 IPR001313 GO:0003723
Pste2g02770 660 ProSiteProfiles Pumilio RNA-binding repeat profile. 418 453 IPR001313 GO:0003723
Pste2g02770 660 SMART pum_5 600 635 IPR001313 GO:0003723
Pste2g02770 660 SMART pum_5 491 526 IPR001313 GO:0003723
Pste2g02770 660 SMART pum_5 379 414 IPR001313 GO:0003723
Pste2g02770 660 SMART pum_5 563 597 IPR001313 GO:0003723
Pste2g02770 660 SMART pum_5 418 453 IPR001313 GO:0003723
Pste2g02770 660 SMART pum_5 455 490 IPR001313 GO:0003723
Pste2g02770 660 SMART pum_5 527 562 IPR001313 GO:0003723
Pste2g02770 660 SMART pum_5 343 378 IPR001313 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02770 Pste-Chr2 27787220 27790661 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02770 2 27787220 27790661 Pste2g02770 2 27787220 27790661 ECH
Pste8g01856 8 13264524 13270392 Pste2g02770 2 27787220 27790661 PCT