Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02621 AAATCAAGCACGCAAGCTGATATTTGAAAACTGAAAAGAGCCCTCTCTTGAATTTGAATTCCAATTTGGTTGGGAAGATGAAGAACGAATCGCATTCCAAAGAGGAAACGAAGACGTATCAGGAGTGGTTCAATTTGGCCGACTCAGATCGAGATGGACGAATATCTGGAAATGACGCGACAAAGTTCTTCGCTCTCTCCAACTTGTCCCGCTCTCAACTCAAGCAGCTCTGGGCTCTCGCCGATGTCAAACGACAAGGGTTTTTGGGTTTCTCAGAGTTTGTTACTGCTATGCAGTTGGTTTCGCTGGCACAAGCAGGGCAAGAACTTAACTCAGATATCCTCAAAACGCAAATTAACAAGGAAAATATTAAACCTCCTGTATTGGAAGGACTCGAAGCTTTAGTAGCACAAAAGAGTTTAGCAATAAGTGTCCCCGCCGAAGTAAATGTCATTGCTCAGCCTCAAGGGTTTCCAACCAACCGTTGGTTTGGTTCAAAATCTTCAAAAAAGTTACCGCTCAATTCAGTTACATCAATCATTGATGGCTTGAAGAAATTGTATATTGAGAGGTTAAAGCCCTTGGAAATCACTTATCGATATAATGATTTTGTTTCTCCATTGTTGACCAACACTGACTTTGATGCCAAACCCATGGTCATGCTTCTTGGTCAATATTCAACAGGAAAAACTACATTTATAAAACATTTGTTGAAATGTGATTATCCAGGAGCACACGTTGGACCAGAGCCTACCACTGATAGATTTGTTGTTGTCATGTCTGGACCTGATGAGAGAAGTATTCCTGGAAATACTATTGCTGTTGATGCCGACATGCCTTTTGGTGGCCTGACAACATTTGGAGGTTCATTTTTATCAAAGTTTCAATGTTCTCAAATGCCACATCCTTTGTTAGATGAAGTAACATTTGTGGACACTCCTGGTGTCCTATCTGGAGAGAAACAAAGGACGCAAAGAAGCTACGATTTCACTGGTGTTGTGTCTTGGTTTGCTGCAAAATGTGATCTCATTCTTCTCCTATTTGATCCTCATAAGCTAGACATCAGTGACGAGTTTAAACGTGTAATCACGTCTCTACGTGGTAATGATGACAAGATACGAGTGGTTTTGAACAAGGCAGACCAAGTTGATACTCAACAACTTATGAGAGTTTATGGAGCATTGATGTGGTCTATGGGGAAAGTTCTAAACACTCCCGAAGTTACACGTGTTTACATTGGCTCATTTAATGATAAGCCTATAGATGAAGTCTTCGTCAGTCCATTAGGACAGGATCTCTTTGAGAAGGAACAGAATAATCTGCTTGCTGATTTGATAGATATTCCAAAGAAGGCATGCGATCGTCGGATCAATGAATTCGTGAAACGTGCTAGATCGGCTAAAATTCATGCATATATAATTAGCCACCTTAAGAAGGAGATGCCTGCTATTATGGGCAAAGCGAAGGCACAGCAAAGACTTCTTGATAATCTTGAAGAAGAATTTGCAAAGGTTCAAAGGGAGTTTCATCTACCAGCTGGTGATTTTCCCAATATCGAACACTTCAGAGAAGTTTTAAGTGGTTATAGCATCGACAAATTTGAGAAACTAAAGCCTAAAATGATTCAAGCCGTAGATGACATGCTCGGATATGAAATACCAGAGCTTATGAAGAAATTCAGAAACCCTTACGATTAAATAATAATAAATGTTAAAAAAATGTTATCATTTGTCATGTATGTTTAGCTAGTGTGAGATCTTAATGTTCAAGTTTCATTATTAGTGGATTGTGGATGGTTTCTTTGCCACTGTATTGCGTCCATATTCAGTTCATAGCTCTTGGTAATCCATTGTAGAAAAAGGAAGAAAATATTTCTGCCATTTTTGTTTGTCTTACAAGGAGGGTGGCAGTGCACTAGTACCTCAAATATTTCTTATCCCGAAGGCACTACTGGCAGCTAACATTTCTATTGCCCTGTGTTGTTGCATACTCCAGGTCCAATATTCATTGTTTCAGACAAGAAATAGTATTTAAATTCCAAATAATTTTCAGTGAGATATGTGCTATCGAAGAAAACTCATTTTCTTACCATCAAGGGAAAGCAATTTCAGTGTGCGCATTCGGAGAAAAATAGTATCACAATATATCAGTTTTTTTCTATGGCAGAACTCGTAG 2175 0.3903 MKNESHSKEETKTYQEWFNLADSDRDGRISGNDATKFFALSNLSRSQLKQLWALADVKRQGFLGFSEFVTAMQLVSLAQAGQELNSDILKTQINKENIKPPVLEGLEALVAQKSLAISVPAEVNVIAQPQGFPTNRWFGSKSSKKLPLNSVTSIIDGLKKLYIERLKPLEITYRYNDFVSPLLTNTDFDAKPMVMLLGQYSTGKTTFIKHLLKCDYPGAHVGPEPTTDRFVVVMSGPDERSIPGNTIAVDADMPFGGLTTFGGSFLSKFQCSQMPHPLLDEVTFVDTPGVLSGEKQRTQRSYDFTGVVSWFAAKCDLILLLFDPHKLDISDEFKRVITSLRGNDDKIRVVLNKADQVDTQQLMRVYGALMWSMGKVLNTPEVTRVYIGSFNDKPIDEVFVSPLGQDLFEKEQNNLLADLIDIPKKACDRRINEFVKRARSAKIHAYIISHLKKEMPAIMGKAKAQQRLLDNLEEEFAKVQREFHLPAGDFPNIEHFREVLSGYSIDKFEKLKPKMIQAVDDMLGYEIPELMKKFRNPYD 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02621 539 CDD EH 14 80 IPR000261 GO:0005515
Pste2g02621 539 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 188 423 IPR030381 GO:0005525
Pste2g02621 539 Gene3D - 194 422 IPR027417 -
Pste2g02621 539 Coils Coil 462 482 - -
Pste2g02621 539 ProSiteProfiles EF-hand calcium-binding domain profile. 43 78 IPR002048 GO:0005509
Pste2g02621 539 CDD EHD 193 437 - -
Pste2g02621 539 FunFam EH domain-containing protein 1 194 422 - -
Pste2g02621 539 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 461 IPR027417 -
Pste2g02621 539 SMART efh_1 13 41 IPR002048 GO:0005509
Pste2g02621 539 SMART efh_1 47 75 IPR002048 GO:0005509
Pste2g02621 539 Pfam Cytoskeletal-regulatory complex EF hand 8 75 IPR000261 GO:0005515
Pste2g02621 539 Gene3D - 4 102 - -
Pste2g02621 539 SUPERFAMILY EF-hand 7 92 IPR011992 -
Pste2g02621 539 SMART eh_3 3 98 IPR000261 GO:0005515
Pste2g02621 539 Pfam N-terminal EH-domain containing protein 157 189 IPR031692 -
Pste2g02621 539 PANTHER EH DOMAIN 9 536 - -
Pste2g02621 539 Pfam 50S ribosome-binding GTPase 194 353 IPR006073 GO:0005525
Pste2g02621 539 Pfam Domain of unknown function (DUF5600) 429 531 IPR040990 -
Pste2g02621 539 ProSiteProfiles EH domain profile. 10 104 IPR000261 GO:0005515
Pste2g02621 539 Gene3D - 158 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02621 Pste-Chr2 26415573 26420001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02621 8 539 EF-hand Containing Proteins AT4G05520 78.612 0.0 890
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02621 2 26415573 26420001 Pste2g02621 2 26415573 26420001 ECH
Pste6g04424 6 33534239 33540300 Pste2g02621 2 26415573 26420001 PCT