Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01817 ATGTTTTCAGTTGTTGCAGATTGTGTGCGTGAGATTGATGCTCAGCAAGTCTTTGGCTATGCTCTTTACAAGGACGGGAAAAATACTAAGCTTTCTTATCCTTTGGAAAAAATTGACTCAGATGTTTCTGGAAGAAGCTTTCACAATGGCCGTTTCATACAGAGGATGCGAGAAAAGGCTTCATCTCTTCCAACTGTAAAATTAGAACAAGGAACTGTTACATCTCTACTAGAAGAAAATAAAACCATCAAAGGGGTACATTACAAAACCAAGAGTGGACAAGAGCTCACAGCTAAGGCTCCCCTTACCATAGTATGCGATGGCTGTTTTTCCAACTTGAGACGATCCCTTTGCAACCCAAAGGTTGATGTACCATCTCATTTTGTTGGTCTGGTCCTAGAGAACTGCAATCTTCCATATGCAAACTACGGACACGTTATCTTGGGTGATCCTTCTCCCGTTTTGTTTTATCCCATAAGTAGCACTGAGATTCGGTGTTTGGTTGATGTTCCTGGCCAAAAACTACCTTCCATTGGTAATGGTGACATGGCCCGTTATTTGAAAACAGTAGTAGCTCCCCAGGTTCCCCCAGAGTTGCATGACTCTTTTATAGCAGCAGTTGACAAAGGAAACATAAGAAGCATGCCAAACAGAAGTATGCCTGCATCTCCTTATCCTACACCTGGTGCTCTTCTCATGGGAGATGCCTTCAACATGCGTCACCCTTTGACTGGAGGGGGAATGACTGTGGCTTTGTCTGACATTGTTTTGCTTAGGAACCTTCTTAGACCCCTGCATGATCTTCATGATGCTAATGCTCTTTGCAAATATCTTGAATCATTCTACACCCTGCGCAAGCCAGTAGCATCCACCATAAATACATTAGCCGGGGCATTATACAAGGTGTTTTGTGCATCCCCTGATCCAGCTAGTAAGGAAATGCGCCAGGCATGTTTTGATTATTTAAGTCTTGGGGGTGTTTTCTCAGATGGACCAATAGCTCTACTCTCTGGTCTAAATCCTCGTCCATTAAGCTTGGTTCTTCACTTCTTTGCCGTGGCTATATATGGAGTCGGTCGCTTACTCATACCATTCCCTTCTATAAAACGCATGTGGATTGGTGCTAGATTGATTTCCGGCGCCTCTGCTATTATTTTCCCCATTATCAAGTCTGAAGGAATTAGACAAATGTTCTTCCCAGTAACTGTGCCAGCATATTACAGAACACCTCCTACCAATTTGCATGATTAAATTTAAATCTTGGATGGAAAGACATGAATATATAATCGTGCCTGCATTAACTGTACTTGTGATTAGTCAGTCCTACAGAAAAGAATAAGAGACTCTAGAGGAGAATTTTGGTCCATATATTAGGGCAATAATTTTGTGCGTGTGCAATAATTTTGTATTAATAAAGATTTTAAATGTAATTGTGTCTACTTTAGTACAAAATTAAGTTCCGAGAACCGTCTTTGAAGC 1479 0.4131 MFSVVADCVREIDAQQVFGYALYKDGKNTKLSYPLEKIDSDVSGRSFHNGRFIQRMREKASSLPTVKLEQGTVTSLLEENKTIKGVHYKTKSGQELTAKAPLTIVCDGCFSNLRRSLCNPKVDVPSHFVGLVLENCNLPYANYGHVILGDPSPVLFYPISSTEIRCLVDVPGQKLPSIGNGDMARYLKTVVAPQVPPELHDSFIAAVDKGNIRSMPNRSMPASPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVLLRNLLRPLHDLHDANALCKYLESFYTLRKPVASTINTLAGALYKVFCASPDPASKEMRQACFDYLSLGGVFSDGPIALLSGLNPRPLSLVLHFFAVAIYGVGRLLIPFPSIKRMWIGARLISGASAIIFPIIKSEGIRQMFFPVTVPAYYRTPPTNLHD 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01817 416 Pfam Squalene epoxidase 99 369 IPR013698 GO:0004506|GO:0016020|GO:0050660
Pste2g01817 416 Gene3D - 5 303 IPR036188 -
Pste2g01817 416 SUPERFAMILY FAD/NAD(P)-binding domain 6 324 IPR036188 -
Pste2g01817 416 PANTHER SQUALENE MONOOXYGENASE 6 411 IPR040125 GO:0004506|GO:0016126
Pste2g01817 416 FunFam Squalene monooxygenase 2 3 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01817 Pste-Chr2 18539129 18542019 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01817 5 412 Miscellaneous Gene Families AT1G58440 79.412 0.0 688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01817 2 18539129 18542019 Pste2g01817 2 18539129 18542019 ECH
Pste3g03524 3 27700275 27703916 Pste2g01817 2 18539129 18542019 PCT