Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01667 CTCCGTCTCCGGAGATTCTCACTCTTCACCCAACGCTTCCGTACCCTTCACGATCACTGCTCCCCTTCCCAGTCTTCTTCCTCTCCCAACCCGCGTAACACTCCCAAGTGGGCTTCCGCCATTGTTGTAGCCTCTGCTTTTGCCCTTTTATATTGCTTCACCACGCCCAATTCACACTTAGACCTCTCCAACAATGCCCCTCGCACTTCTTCTTCCCCATTGTTTGGAAAATTCTCCCTTCCGGATAGTACCCATGCCTTGCTTTTTGGAGATGCGTACAGAAGTAAGGTTTTCTTCAACTATGAGAAGCGCCTACGGTTGCATAGTCCGCCCGAAAAGGTTTTTGAATACTTTGCATCTTGTCGTACTCCAGAAGGAGAACCGCTGATGAAGCCAGTGGACCTAATGCGAGCAGTTGTTCCTGTTTTCCCTCCATCAGAATCCAACCTTGTGAGAGAGGGATACTTGAAAGGTGAAAGAAGTCCTGGCCATTTGTGCTGTCCTGCTTCAGAGTTTTTTATGCTTTTTGATGTAGATAACGACGAGCTTATATCTTTCAAAGAGTATATCTTTTTTGTCACTCTGCTTAGCATATCAGAATCAAGCTTTTCTGCAGCATTTAAAATGTTTGACAAGGATGACGACGGGGAGATAGATAAGGAGGAATTCAAGAAAGTGACGCAATCAATGCGATCTCATACCAGACAAGGTGTTAACCACAGGGATGGACGACGAACCGGCCTAAAGGCCAATGCTTCTGTAGAAAATGGAGGGCTGATGGAATACTTATTTGGTAAAGATGGAAAGGGACGCCTCAGACATGATAAATTCGTGCAATTTATAAGAGACTTGCATAATGAAATTGTGAGGTTGGAGTTTGCTCATTATGATTTCAAATCTCGAAAAACCATATCGGCCAAGGACTTTGCACACTCCATTGTTGCTTCTGCTGACTTGAGTCATCTAGGAAAGTTACTTGAACGGGTTGATGACTTAAACAATGATCCAAGGTTAAGGGATGTACGCATAACATTTGAGGAGTTCAAAAATTTTGCAGAGCTGAGGAAAAAATTATTACCATTTTCATTGGCCATTTTCAGTTTTGCAGAAGTACAAGGCCTGTTGACAAGGAATGATTTTCAGCGAGCTGCATCACATGTTTGTGGCTTGTCTCTCTCGGACAATGTGGTTGAGATTGTTTTCCATTTGTTTGACGCAAATGAGGATGGAAACCTGAGTACGGATGAGTTTGTTAGAGTGCTACAACATCGAGAAAGAGACATTGCTCAACCTGTGGAGACAGGAATCATGGGTTTCTTGGCATGCTGCTGGAAATGTACGGACACCTCCCCATCTTCTCGGTTGTTTCGT 1371 0.4413 LRLRRFSLFTQRFRTLHDHCSPSQSSSSPNPRNTPKWASAIVVASAFALLYCFTTPNSHLDLSNNAPRTSSSPLFGKFSLPDSTHALLFGDAYRSKVFFNYEKRLRLHSPPEKVFEYFASCRTPEGEPLMKPVDLMRAVVPVFPPSESNLVREGYLKGERSPGHLCCPASEFFMLFDVDNDELISFKEYIFFVTLLSISESSFSAAFKMFDKDDDGEIDKEEFKKVTQSMRSHTRQGVNHRDGRRTGLKANASVENGGLMEYLFGKDGKGRLRHDKFVQFIRDLHNEIVRLEFAHYDFKSRKTISAKDFAHSIVASADLSHLGKLLERVDDLNNDPRLRDVRITFEEFKNFAELRKKLLPFSLAIFSFAEVQGLLTRNDFQRAASHVCGLSLSDNVVEIVFHLFDANEDGNLSTDEFVRVLQHRERDIAQPVETGIMGFLACCWKCTDTSPSSRLFR 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01667 457 Gene3D - 372 433 - -
Pste2g01667 457 ProSitePatterns EF-hand calcium-binding domain. 405 417 IPR018247 -
Pste2g01667 457 ProSiteProfiles EF-hand calcium-binding domain profile. 198 233 IPR002048 GO:0005509
Pste2g01667 457 Gene3D - 244 356 - -
Pste2g01667 457 SUPERFAMILY EF-hand 169 313 IPR011992 -
Pste2g01667 457 Gene3D - 155 236 - -
Pste2g01667 457 Pfam EF-hand domain 205 226 IPR002048 GO:0005509
Pste2g01667 457 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 25 448 IPR039800 GO:0005509|GO:0006851
Pste2g01667 457 SUPERFAMILY EF-hand 292 425 IPR011992 -
Pste2g01667 457 SMART efh_1 202 230 IPR002048 GO:0005509
Pste2g01667 457 SMART efh_1 168 196 IPR002048 GO:0005509
Pste2g01667 457 SMART efh_1 396 424 IPR002048 GO:0005509
Pste2g01667 457 CDD EFh 171 225 IPR002048 GO:0005509
Pste2g01667 457 Pfam EF-hand domain pair 373 424 IPR002048 GO:0005509
Pste2g01667 457 ProSiteProfiles EF-hand calcium-binding domain profile. 392 427 IPR002048 GO:0005509
Pste2g01667 457 CDD EFh_MICU 203 424 - -
Pste2g01667 457 ProSitePatterns EF-hand calcium-binding domain. 211 223 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01667 Pste-Chr2 17423012 17426616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01667 36 389 EF-hand Containing Proteins AT4G32060 60.743 2.72e-156 449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01667 2 17423012 17426616 Pste2g01667 2 17423012 17426616 ECH
Pste8g00054 8 290281 293483 Pste2g01667 2 17423012 17426616 PCT