Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01452 TTACGCTAAAATATTTTTTTAAAAGATCAGGGTAATGCTAATGCAGTTCCAATAAAAAAGTAAAATACACTGAAGCTAAGCTATACAGCGCGACGCCAGTGTTGTTCCTTTTCCTTTCTAAGACCTCAGCTTGACCACCCTCTCTCCTATGGCCACCGCCGAACCTCTCCTGAACGGTGCCGCCGGAAACCCTCTCCCGCCGGACAATGACTCCGCCGCGCCACCCAGCGAGACGGAAGCTGACACCGCCGCGGCGTCCTCTCCGCTGGAGAAGAGGTGGCCGGGTTGGCCCGGGGACTGCGTGTTCCGTCTAATCGTGCCGGTGGGGAAAGTTGGAAGCATCATTGGGCGCAAGGGAGAGCTCATAAAGAAGATGTGCGAAGAAACTCGATCTCGCATTCGCGTTCTCGACGCCCCTCTCGGCACTCCTGATCGAATTGTGCTGGTATCAGGGAAGGAAGAGCTAGAGGCAACTCTTTCCCCTGCAATGGATGCTGTAATTAGGGTGTTCAAACGTGTCTCTGGATTATCTGAAACTGATGCTGAGAATAAAGAATCTTCTGCTGGTCATACATTTTGTTCAATCCGTTTATTGGTGGCATCAACGCAAGCTATTAATTTAATTGGAAAGCAAGGCTCGTTAATCAAATCTATTCAGGAGAATACTGGTGCTTCTGTTAGAGTACTGTCAGGAGATGAGCTGAAAACGTATGCAACTGCGGATGAGAGGATTGTTGAAATGCAAGGAGAAGCCTTCAAGGTCCTTAAAGCTCTTGAAGCAGTAGTTGGTCATCTGAGGAAATTTTTGGTTGATCATAGCGTTCTTCCCCTATTTGAGAAAACTTACAATGTGCCAATTTCACAAGACCGTCAGACAGAGACCTGGTCCGATAAGTCATTCCTGCATAGTAATTCACAAACTAGCATTTTTTCTGATATTCCTCTTCCAACAAAAAGGGATTCTGTCTTAGCTGACCGCGAAAGTCAATTGGACTCATTACTCCCTTCCTCCACAATGTCTCTCTATGGGCAAGATTCTTCACTTTCTGGTGGCCGTTCTTCAGCTCTTGGCCGTGTTGGTGCTCCTATTGTTACTACGGTAATACAAACTATGCAAATACCACTTTCCTATGCGGAGGACATTATTGGTATTCAAGGTTCTAATATCGATTACATTCGCCGCACTAGTGGAGCCATATTGACTGTGCAGGAGAGTAGGGTGCCTGATGAAATTATCGTGGAAATAAAAGGCACTTCATCTCAGGTTCAAACAGCACAACAATTGATTCAGGATGTTGTAAGCAGTCACAAAGAACCTGTCACTAGCAGTTACGGCAGGCTAGATGCAGGTCTGAGGTCTTCATACTCTCAGTTGGGCACTACATCACGCCTCCCATCTTCCTTGTCCTCACAACCATACACAGGTTATGGAGCTTCTGGTTTAGGAGACTACAGTACTTTCAGGCTTTAAATTGGTCTTACTTATATGCAAGGGTACACCATTTGGATTAGCTTCTTTCTAATTGGGTCTGATTGGAGAGAATTAACGCTTGAATATCATGAAGCCTCAGATAAGCTTGTTTTTATGTATTTGATATCATCTTTTGTATCATGGGTAATTTTAGAGGTGGGCAATAGTTGAGAATTTTTATAGAAAATGTAATGAAATATTAATTAGCCATTCTGATAATTTTGGTTTTTTTAAGAGCAAATGTGGAGCATGTTGCAATACCAATATCAGTACTGTATTAATTGTTCGATATTTCAAAAGGTTAAAGTCTCATTTTAAATT 1792 0.4353 MATAEPLLNGAAGNPLPPDNDSAAPPSETEADTAAASSPLEKRWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEELEATLSPAMDAVIRVFKRVSGLSETDAENKESSAGHTFCSIRLLVASTQAINLIGKQGSLIKSIQENTGASVRVLSGDELKTYATADERIVEMQGEAFKVLKALEAVVGHLRKFLVDHSVLPLFEKTYNVPISQDRQTETWSDKSFLHSNSQTSIFSDIPLPTKRDSVLADRESQLDSLLPSSTMSLYGQDSSLSGGRSSALGRVGAPIVTTVIQTMQIPLSYAEDIIGIQGSNIDYIRRTSGAILTVQESRVPDEIIVEIKGTSSQVQTAQQLIQDVVSSHKEPVTSSYGRLDAGLRSSYSQLGTTSRLPSSLSSQPYTGYGASGLGDYSTFRL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01452 440 MobiDBLite consensus disorder prediction 1 42 - -
Pste2g01452 440 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 41 394 - -
Pste2g01452 440 ProSiteProfiles Type-1 KH domain profile. 317 380 - -
Pste2g01452 440 Gene3D - 50 220 - -
Pste2g01452 440 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 313 386 IPR036612 GO:0003723
Pste2g01452 440 CDD KH-I_PEPPER_rpt1_like 50 118 - -
Pste2g01452 440 ProSiteProfiles Type-1 KH domain profile. 50 117 - -
Pste2g01452 440 ProSiteProfiles Type-1 KH domain profile. 143 212 - -
Pste2g01452 440 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 140 224 IPR036612 GO:0003723
Pste2g01452 440 Pfam KH domain 146 212 IPR004088 GO:0003723
Pste2g01452 440 Pfam KH domain 53 105 IPR004088 GO:0003723
Pste2g01452 440 Pfam KH domain 320 382 IPR004088 GO:0003723
Pste2g01452 440 CDD KH-I_PEPPER_rpt2_like 147 217 - -
Pste2g01452 440 Gene3D K Homology domain, type 1 315 389 IPR036612 GO:0003723
Pste2g01452 440 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 43 105 IPR036612 GO:0003723
Pste2g01452 440 SMART kh_6 49 122 IPR004087 GO:0003676
Pste2g01452 440 SMART kh_6 142 217 IPR004087 GO:0003676
Pste2g01452 440 SMART kh_6 316 385 IPR004087 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01452 Pste-Chr2 15821890 15831813 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01452 2 15821890 15831813 Pste2g01452 2 15821890 15831813 ECH
Pste6g03778 6 26935207 26941265 Pste2g01452 2 15821890 15831813 PCT