Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01422 CATGCGTACACACTATATAATCCCTCTTCCTACACCCAAACTCTCTCTCTTTCCAAGTGTTTGAATTTGTTTCCACTTCCCAAGGGGAGAAAAAAAAAAGTCAAAAATCGAGAAGAAAAAGAGATATCTTTTGAAACGTTTGTGATCGAATTTCTATTATATAAACTATAAAGTGTTTTGCAATTATATATCATGAGTATGTATCAATTGCAACAGTTTCATCATCATCAACAACCCATGATGAAGATGGACTCCATGAGGAAGAGGGAGAGAAACAAATCCGTGGACAAAGAGAGGCTTCAAGTCATGGATTTGAGTGGCATGTCCTTGGACTTTCTTCCCAAACCTTCTCTTGATTTAGCCACCATTTGCAAGTTGGACCTATCCAATAACAATCTCCAGGAAATTCCGGAATCCTTAACGGCGAGATTATTGAACGTGATAGTGTTGGACGTGCGGTCCAACCAGCTCAAATCTCTTCCTAATTCCATTGGCTGTCTCTCTAAGCTCAAGGTTTTGAATGTCTCAGCCAACTTCATCCAATCCCTCCCCAAAACCATTGAGAATTGCAGAGCCTTAGAAGAAGTGAATGCCAACTTCAACAAGCTGAGCATGCTGCCAGACACAATAGGGTTTGAACTCATAAACCTGAAGAAGCTATCAGTGAACTCCAACAAGTTGATGTATCTTCCAAGCTCCACCTCACACCTAACAGCTCTGAAGGTTCTTGATGCACGGTTGAATTGCCTAAGGGCACTACCGGAGGACCTTGAGAATCTCATCAACCTTGAGACCCTTAATGTGAGTCAGAACTTTCAGTACTTGGAGACCCTACCCTACTCCATAGGGCTCCTCTTGTCCTTAGTTGAACTTGATGTTAGCTACAACAACATCAAGATTTTGCCTGAGTCCATTGGGTGCCTCAAGAAGCTGCAGAAGCTAAGTGTTGAAGGGAACCCTCTAACTTGTCCCCCTATGGAGGTGGTAGATCAGGGTCTGCATGTGGTGATGGAGTATATGCAGCATAAGATTAACTCAAGTGATGAAAACAAATCAAAGAAAAAGGGGTGGATGGTGAAGATAGTGAAGTGTGGAACATTCAATATTAAACATGTGAGACATGGGAAACGACCAGAACATGCGGGTTACAACATGCTTAAGCATCAGAAGATCAATGGTCTTGCTTCTCCTGGCCTCATGGGAATGCTCTCTCCTCTTCGCATCTTCTCTCCCCGTCGTTCCTTCGATTGAGAAGTGCCAAATTATATTTTTGTAAAGCATACTCTCTTTTCAACAAAAATTATTACATGATCCTAGAACATATCGTCTAGCTCATTTTCATGTGACACTTAATTGAGGTTTTTAAATCACAAAAAAAAAAACAAAAAACAAAAACAAGACCGAGATAAATACTCAATTATGTAGCATGTGAAACTGTTAAAAAATGTAGTTTTGAATCATGTAATAGTTTCTATGTTGAATAGTTTGGTTGGCTGTGGTTGCATTCCAACAATCAAAGTTGTGACGATTATGAATGAGAGAAATTGCGAGTTGGGTTATTGCATGTAAAATATAATAGATATAATTTATCATTGAGTTGAAAATGATGGTGGGTTTGTTTTGTTTCTCAGACTTTGAAAGTCTATTCATGTAAAGTTAGTTTCTTCTGAAGATGGATCAATGGATGTTACAAGATAAGATGAGCGAATCTAGCTAGTTTCTTGTCGATTCTTTAATCATGTATGATGTTGTAGATTTGTTGGCAATGCACCATTTTGTTGTAGGTA 1787 0.3912 MSMYQLQQFHHHQQPMMKMDSMRKRERNKSVDKERLQVMDLSGMSLDFLPKPSLDLATICKLDLSNNNLQEIPESLTARLLNVIVLDVRSNQLKSLPNSIGCLSKLKVLNVSANFIQSLPKTIENCRALEEVNANFNKLSMLPDTIGFELINLKKLSVNSNKLMYLPSSTSHLTALKVLDARLNCLRALPEDLENLINLETLNVSQNFQYLETLPYSIGLLLSLVELDVSYNNIKILPESIGCLKKLQKLSVEGNPLTCPPMEVVDQGLHVVMEYMQHKINSSDENKSKKKGWMVKIVKCGTFNIKHVRHGKRPEHAGYNMLKHQKINGLASPGLMGMLSPLRIFSPRRSFD 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01422 352 MobiDBLite consensus disorder prediction 1 31 - -
Pste2g01422 352 SMART LRR_typ_2 80 102 IPR003591 -
Pste2g01422 352 SMART LRR_typ_2 56 79 IPR003591 -
Pste2g01422 352 SMART LRR_typ_2 150 172 IPR003591 -
Pste2g01422 352 SMART LRR_typ_2 103 126 IPR003591 -
Pste2g01422 352 SMART LRR_typ_2 127 149 IPR003591 -
Pste2g01422 352 SMART LRR_typ_2 221 244 IPR003591 -
Pste2g01422 352 SMART LRR_typ_2 173 196 IPR003591 -
Pste2g01422 352 SUPERFAMILY L domain-like 34 260 - -
Pste2g01422 352 ProSiteProfiles Leucine-rich repeat profile. 223 244 IPR001611 GO:0005515
Pste2g01422 352 ProSiteProfiles Leucine-rich repeat profile. 58 79 IPR001611 GO:0005515
Pste2g01422 352 SMART LRR_bac_2 56 75 - -
Pste2g01422 352 SMART LRR_bac_2 103 122 - -
Pste2g01422 352 SMART LRR_bac_2 126 145 - -
Pste2g01422 352 SMART LRR_bac_2 221 240 - -
Pste2g01422 352 SMART LRR_bac_2 150 169 - -
Pste2g01422 352 SMART LRR_bac_2 196 217 - -
Pste2g01422 352 SMART LRR_bac_2 80 99 - -
Pste2g01422 352 SMART LRR_bac_2 173 192 - -
Pste2g01422 352 PANTHER - 150 268 - -
Pste2g01422 352 Pfam Leucine rich repeat 61 114 IPR001611 GO:0005515
Pste2g01422 352 Gene3D Ribonuclease Inhibitor 2 147 IPR032675 -
Pste2g01422 352 Gene3D Ribonuclease Inhibitor 149 279 IPR032675 -
Pste2g01422 352 MobiDBLite consensus disorder prediction 16 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01422 Pste-Chr2 15461143 15465622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01422 49 257 Receptor kinase-like Gene Family AT4G04220 29.646 1.55e-07 51.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01422 2 15461143 15465622 Pste2g01422 2 15461143 15465622 ECH
Pste6g03722 6 26386729 26390547 Pste2g01422 2 15461143 15465622 PCT